RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 MAPTP10636 758 aaKnown RBP13.36□□□□□ -0.27
SNHG4-208ENST00000514110 PLS3P13797 630 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 SLC12A3P55017 1021 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 RABEP1Q15276 862 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 RILPL1Q5EBL4 403 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 SLC8B1Q6J4K2 584 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 POTEHQ6S545 545 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 MTSS1LQ765P7 747 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 RTL10Q7L3V2 364 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 TMEM130Q8N3G9 435 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 TMEM161BQ8NDZ6 487 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 ZNF461Q8TAF7 563 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 SPIRE2Q8WWL2 714 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 ING5Q8WYH8 240 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 KXD1Q9BQD3 176 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 TIPINQ9BVW5 301 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 FOXQ1Q9C009 403 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 HAPLN2Q9GZV7 340 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 ANKFY1Q9P2R3 1169 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 SIT1Q9Y3P8 196 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 KIF3AQ9Y496 699 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 NPHP3-ACAD11A0A0J9YXS1 232 aa13.35□□□□□ -0.27
SNHG4-208ENST00000514110 SYN3O14994 580 aa13.35□□□□□ -0.27
SNHG4-208ENST00000514110 LRRN2O75325 713 aa13.35□□□□□ -0.27
SNHG4-208ENST00000514110 TOM1L1O75674 476 aa13.35□□□□□ -0.27
SNHG4-208ENST00000514110 ABLIM3O94929 683 aa13.35□□□□□ -0.27
SNHG4-208ENST00000514110 RHOP08100 348 aa13.35□□□□□ -0.27
SNHG4-208ENST00000514110 GLULP15104 373 aa13.35□□□□□ -0.27
SNHG4-208ENST00000514110 GJB2P29033 226 aa13.35□□□□□ -0.27
SNHG4-208ENST00000514110 RPL9P32969 192 aaKnown RBP13.35□□□□□ -0.27
SNHG4-208ENST00000514110 ARPP19P56211 112 aa13.35□□□□□ -0.27
SNHG4-208ENST00000514110 STARD6P59095 220 aa13.35□□□□□ -0.27
SNHG4-208ENST00000514110 CACNB1Q02641 598 aaPredicted RBP13.35□□□□□ -0.27
SNHG4-208ENST00000514110 STRN3Q13033 797 aa13.35□□□□□ -0.27
SNHG4-208ENST00000514110 SNW1Q13573 536 aaKnown RBP13.35□□□□□ -0.27
SNHG4-208ENST00000514110 NOLC1Q14978 699 aaKnown RBP eCLIP13.35□□□□□ -0.271e-323■■■■■ 39.1
SNHG4-208ENST00000514110 SLC5A9Q2M3M2 681 aa13.35□□□□□ -0.27
SNHG4-208ENST00000514110 SLC10A6Q3KNW5 377 aa13.35□□□□□ -0.27
SNHG4-208ENST00000514110 TMX3Q96JJ7 454 aa13.35□□□□□ -0.27
SNHG4-208ENST00000514110 KCNH3Q9ULD8 1083 aa13.35□□□□□ -0.27
SNHG4-208ENST00000514110 MRPS23Q9Y3D9 190 aaKnown RBP13.35□□□□□ -0.27
SNHG4-208ENST00000514110 CITO14578 2027 aa13.34□□□□□ -0.27
SNHG4-208ENST00000514110 PDCD11Q14690 1871 aaKnown RBP13.34□□□□□ -0.27
SNHG4-208ENST00000514110 ARHGEF37A1IGU5 675 aa13.34□□□□□ -0.27
SNHG4-208ENST00000514110 SEC24AO95486 1093 aa13.34□□□□□ -0.27
SNHG4-208ENST00000514110 PLA2G4BP0C869 781 aa13.34□□□□□ -0.27
SNHG4-208ENST00000514110 CEBPBP17676 345 aa13.34□□□□□ -0.27
SNHG4-208ENST00000514110 SMTNP53814 917 aa13.34□□□□□ -0.27
SNHG4-208ENST00000514110 MCL1Q07820 350 aa13.34□□□□□ -0.27
SNHG4-208ENST00000514110 MRPL58Q14197 206 aaKnown RBP13.34□□□□□ -0.27
SNHG4-208ENST00000514110 TMEM119Q4V9L6 283 aa13.34□□□□□ -0.27
SNHG4-208ENST00000514110 ARSHQ5FYA8 562 aa13.34□□□□□ -0.27
SNHG4-208ENST00000514110 PJA1Q8NG27 643 aa13.34□□□□□ -0.27
SNHG4-208ENST00000514110 MCRS1Q96EZ8 462 aa13.34□□□□□ -0.27
SNHG4-208ENST00000514110 SUSD3Q96L08 255 aa13.34□□□□□ -0.27
SNHG4-208ENST00000514110 PLA2G2FQ9BZM2 168 aa13.34□□□□□ -0.27
SNHG4-208ENST00000514110 TUBGCP4Q9UGJ1 667 aa13.34□□□□□ -0.27
SNHG4-208ENST00000514110 FBXL5Q9UKA1 691 aa13.34□□□□□ -0.27
SNHG4-208ENST00000514110 NUB1Q9Y5A7 615 aa13.34□□□□□ -0.27
SNHG4-208ENST00000514110 MYH11P35749 1972 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 H3BQV1 296 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 H7C4K7 107 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 PRRG1O14668 218 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 LRG1P02750 347 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 CXCL8P10145 99 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 ATF2P15336 505 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 PTPN2P17706 415 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 ELF1P32519 619 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 NCKAP1LP55160 1127 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 SPAG1Q07617 926 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 CTXN3Q4LDR2 81 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 SLC44A4Q53GD3 710 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 PRSS36Q5K4E3 855 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 ARL6IP4Q66PJ3 421 aaKnown RBP13.33□□□□□ -0.28
SNHG4-208ENST00000514110 ZPBP2Q6X784 338 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 C1orf210Q8IVY1 113 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 TCEAL8Q8IYN2 117 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 ADSSL1Q8N142 457 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 KCTD17Q8N5Z5 321 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 LRRC15Q8TF66 581 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 TCEAL4Q96EI5 215 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 SHDQ96IW2 340 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 CDK5RAP3Q96JB5 506 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 TBC1D32Q96NH3 1257 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 DDX23Q9BUQ8 820 aaKnown RBP13.33□□□□□ -0.28
SNHG4-208ENST00000514110 CYP4F11Q9HBI6 524 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 AVENQ9NQS1 362 aaPredicted RBP13.33□□□□□ -0.28
SNHG4-208ENST00000514110 KCND2Q9NZV8 630 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 MTF2Q9Y483 593 aaPredicted RBP13.33□□□□□ -0.28
SNHG4-208ENST00000514110 R4GN57 208 aa13.33□□□□□ -0.28
SNHG4-208ENST00000514110 KANSL1LA0AUZ9 987 aa13.32□□□□□ -0.28
SNHG4-208ENST00000514110 NRG2O14511 850 aaPredicted RBP13.32□□□□□ -0.28
SNHG4-208ENST00000514110 CLDN3O15551 220 aa13.32□□□□□ -0.28
SNHG4-208ENST00000514110 MCM4P33991 863 aa13.32□□□□□ -0.28
SNHG4-208ENST00000514110 TNFSF9P41273 254 aa13.32□□□□□ -0.28
SNHG4-208ENST00000514110 CCR2P41597 374 aa13.32□□□□□ -0.28
SNHG4-208ENST00000514110 MATR3P43243 847 aaKnown RBP eCLIP13.32□□□□□ -0.28
SNHG4-208ENST00000514110 PRKCQQ04759 706 aa13.32□□□□□ -0.28
SNHG4-208ENST00000514110 MLF2Q15773 248 aaPredicted RBP13.32□□□□□ -0.28
SNHG4-208ENST00000514110 TANGO2Q6ICL3 276 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms