RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 ANKRD36BP1Q96IX9 119 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 CNOT6LQ96LI5 555 aaKnown RBP10.99□□□□□ -0.65
NEDD9-214ENST00000513989 GAD1Q99259 594 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 MRPL9Q9BYD2 267 aaKnown RBP10.99□□□□□ -0.65
NEDD9-214ENST00000513989 TMEM117Q9H0C3 514 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 SAMSN1Q9NSI8 373 aaKnown RBP10.99□□□□□ -0.65
NEDD9-214ENST00000513989 KLK14Q9P0G3 267 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 CNTN3Q9P232 1028 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 C2CD2Q9Y426 696 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 TTC3P53804 2025 aa10.99□□□□□ -0.65
NEDD9-214ENST00000513989 COL4A6Q14031 1691 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 EVPLQ92817 2033 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 SMIM28A0A1B0GU29 152 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 LRRC10BA6NIK2 292 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 TMEM191BP0C7N4 346 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 CYP3A5P20815 502 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 BFSP1Q12934 665 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 NCAPHQ15003 741 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 MAN2A1Q16706 1144 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 UVSSAQ2YD98 709 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 XKR4Q5GH76 650 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 DCAF17Q5H9S7 520 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-214ENST00000513989 ZBTB41Q5SVQ8 909 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 CDKAL1Q5VV42 579 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 CCDC150Q8NCX0 1101 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 ZSWIM2Q8NEG5 633 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 DDX27Q96GQ7 796 aaKnown RBP10.98□□□□□ -0.65
NEDD9-214ENST00000513989 BORCS6Q96GS4 357 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 SNX27Q96L92 541 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 MED15Q96RN5 788 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 UHRF1Q96T88 793 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-214ENST00000513989 YME1L1Q96TA2 773 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 RAD9AQ99638 391 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 TUBGCP2Q9BSJ2 902 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 PDE11AQ9HCR9 933 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 UBQLN1Q9UMX0 589 aaKnown RBP10.98□□□□□ -0.65
NEDD9-214ENST00000513989 INPP5FQ9Y2H2 1132 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 INSL6Q9Y581 213 aa10.98□□□□□ -0.65
NEDD9-214ENST00000513989 TBKBP1A7MCY6 615 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 DGKIO75912 1065 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 GJB5O95377 273 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 AFPP02771 609 aaKnown RBP10.97□□□□□ -0.65
NEDD9-214ENST00000513989 ALDH2P05091 517 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 PAX3P23760 479 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 RPL9P32969 192 aaKnown RBP10.97□□□□□ -0.65
NEDD9-214ENST00000513989 MLH1P40692 756 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 MCCD1P59942 119 aaPredicted RBP10.97□□□□□ -0.65
NEDD9-214ENST00000513989 CLDN10P78369 228 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 RBP5P82980 135 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 GRIK3Q13003 919 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 TRPC3Q13507 836 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 VWA3BQ502W6 1294 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 HSP90AA4PQ58FG1 418 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 FKBP15Q5T1M5 1219 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 JADE1Q6IE81 842 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 IRF2BP1Q8IU81 584 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 TRIM59Q8IWR1 403 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 TMEM192Q8IY95 271 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 HELQQ8TDG4 1101 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 GDPD5Q8WTR4 605 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 CASD1Q96PB1 797 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 POP1Q99575 1024 aaKnown RBP10.97□□□□□ -0.65
NEDD9-214ENST00000513989 CGRRF1Q99675 332 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 AAASQ9NRG9 546 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 INTS13Q9NVM9 706 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 LIMA1Q9UHB6 759 aaKnown RBP10.97□□□□□ -0.65
NEDD9-214ENST00000513989 RAPGEFL1Q9UHV5 662 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 ARID2Q68CP9 1835 aa10.97□□□□□ -0.65
NEDD9-214ENST00000513989 GOLGA6L3A6NEY3 463 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 INPPL1O15357 1258 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 P4HA2O15460 535 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 CBFA2T2O43439 604 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 TLL1O43897 1013 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 POMCP01189 267 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 FGFR1P11362 822 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 ZNF18P17022 549 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 ATF7P17544 494 aaPredicted RBP10.96□□□□□ -0.65
NEDD9-214ENST00000513989 ALDH7A1P49419 539 aaKnown RBP10.96□□□□□ -0.65
NEDD9-214ENST00000513989 SCNN1GP51170 649 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 PLCB2Q00722 1185 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 KCNH2Q12809 1159 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 MYO1EQ12965 1108 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 BIRC3Q13489 604 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 BTG3Q14201 252 aaPredicted RBP10.96□□□□□ -0.65
NEDD9-214ENST00000513989 WDR44Q5JSH3 913 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 SPOUT1Q5T280 376 aaKnown RBP10.96□□□□□ -0.65
NEDD9-214ENST00000513989 KRT39Q6A163 491 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 FAM117BQ6P1L5 589 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 CRIPAKQ8N1N5 446 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 ZFP42Q96MM3 310 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 UROC1Q96N76 676 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 IMPG2Q9BZV3 1241 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 RBSNQ9H1K0 784 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 NDST4Q9H3R1 872 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 TMEM8AQ9HCN3 771 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 DPP3Q9NY33 737 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 ITGA11Q9UKX5 1188 aa10.96□□□□□ -0.65
NEDD9-214ENST00000513989 MUC6Q6W4X9 2439 aa10.95□□□□□ -0.66
NEDD9-214ENST00000513989 LINC01553A4QN01 128 aa10.95□□□□□ -0.66
NEDD9-214ENST00000513989 LRRIQ3A6PVS8 624 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms