RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 HEPACAM2A8MVW5 462 aa12.39□□□□□ -0.43
RNF4-218ENST00000513284 SLITRK3O94933 977 aa12.39□□□□□ -0.43
RNF4-218ENST00000513284 BRCC3P46736 316 aa12.39□□□□□ -0.43
RNF4-218ENST00000513284 ROR1Q01973 937 aa12.39□□□□□ -0.43
RNF4-218ENST00000513284 ELAVL2Q12926 359 aaKnown RBP12.39□□□□□ -0.43
RNF4-218ENST00000513284 CTTNQ14247 550 aaKnown RBP12.39□□□□□ -0.43
RNF4-218ENST00000513284 EPHA7Q15375 998 aa12.39□□□□□ -0.43
RNF4-218ENST00000513284 SLC8B1Q6J4K2 584 aa12.39□□□□□ -0.43
RNF4-218ENST00000513284 MOXD1Q6UVY6 613 aa12.39□□□□□ -0.43
RNF4-218ENST00000513284 GPIHBP1Q8IV16 184 aa12.39□□□□□ -0.43
RNF4-218ENST00000513284 GAB3Q8WWW8 586 aa12.39□□□□□ -0.43
RNF4-218ENST00000513284 DYDC2Q96IM9 177 aa12.39□□□□□ -0.43
RNF4-218ENST00000513284 LXNQ9BS40 222 aa12.39□□□□□ -0.43
RNF4-218ENST00000513284 CEP72Q9P209 647 aa12.39□□□□□ -0.43
RNF4-218ENST00000513284 DDX25Q9UHL0 483 aaKnown RBP12.39□□□□□ -0.43
RNF4-218ENST00000513284 NAP1L2Q9ULW6 460 aaPredicted RBP12.39□□□□□ -0.43
RNF4-218ENST00000513284 PCDHA4Q9UN74 947 aa12.39□□□□□ -0.43
RNF4-218ENST00000513284 FREM2Q5SZK8 3169 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 LAMA5O15230 3695 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 A0A087WWV3 80 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 MYBPHLA2RUH7 354 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 SLC38A8A6NNN8 435 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 TMEM189-UBE2V1I3L0A0 370 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 ZNF197O14709 1029 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 DKC1O60832 514 aaKnown RBP eCLIP12.38□□□□□ -0.43
RNF4-218ENST00000513284 RECQL4O94761 1208 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 LRG1P02750 347 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 ATF2P15336 505 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 CLCNKBP51801 687 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 NLRP5P59047 1200 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 FOXC1Q12948 553 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 CCINQ13939 588 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 LRRC32Q14392 662 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 OTUD6AQ7L8S5 288 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 CACNA2D4Q7Z3S7 1137 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 NOSTRINQ8IVI9 506 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 TCEAL8Q8IYN2 117 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 TTC8Q8TAM2 541 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 ZSCAN18Q8TBC5 510 aaPredicted RBP12.38□□□□□ -0.43
RNF4-218ENST00000513284 DEPDC1BQ8WUY9 529 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 ZC3H10Q96K80 434 aaKnown RBP12.38□□□□□ -0.43
RNF4-218ENST00000513284 SLC26A6Q9BXS9 759 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 RNF26Q9BY78 433 aaPredicted RBP12.38□□□□□ -0.43
RNF4-218ENST00000513284 ADAM33Q9BZ11 813 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 FZD8Q9H461 694 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 SH3GLB2Q9NR46 395 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 POLR3BQ9NW08 1133 aaPredicted RBP12.38□□□□□ -0.43
RNF4-218ENST00000513284 LHX6Q9UPM6 363 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 NID2Q14112 1375 aa12.38□□□□□ -0.43
RNF4-218ENST00000513284 GCN1Q92616 2671 aaKnown RBP12.38□□□□□ -0.43
RNF4-218ENST00000513284 C4orf47A7E2U8 309 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 SPECC1L-ADORA2AF8WAN1 911 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 TAF4O00268 1085 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 TBX3O15119 743 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 RPP40O75818 363 aaKnown RBP12.37□□□□□ -0.43
RNF4-218ENST00000513284 B3GAT3O94766 335 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 EDN1P05305 212 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 IFNAR1P17181 557 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 NOVA1P51513 510 aaKnown RBP12.37□□□□□ -0.43
RNF4-218ENST00000513284 EPHA5P54756 1037 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 FCHO2Q0JRZ9 810 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 TFDP1Q14186 410 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 MRPL58Q14197 206 aaKnown RBP12.37□□□□□ -0.43
RNF4-218ENST00000513284 KRT32Q14532 448 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 UPP1Q16831 310 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 INF2Q27J81 1249 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 DGKKQ5KSL6 1271 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 RNF43Q68DV7 783 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 Q6ZUG5 572 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 PDZD4Q76G19 769 aaPredicted RBP12.37□□□□□ -0.43
RNF4-218ENST00000513284 CCDC148Q8NFR7 591 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 FAM20AQ96MK3 541 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 PPP1R10Q96QC0 940 aaKnown RBP12.37□□□□□ -0.43
RNF4-218ENST00000513284 SCNM1Q9BWG6 230 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 LRRC3Q9BY71 257 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 SLKQ9H2G2 1235 aaPredicted RBP12.37□□□□□ -0.43
RNF4-218ENST00000513284 PDZD7Q9H5P4 517 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 C8orf33Q9H7E9 229 aaPredicted RBP12.37□□□□□ -0.43
RNF4-218ENST00000513284 ZSWIM4Q9H7M6 989 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 INSL5Q9Y5Q6 135 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 PDCD11Q14690 1871 aaKnown RBP12.37□□□□□ -0.43
RNF4-218ENST00000513284 SPAG17Q6Q759 2223 aa12.37□□□□□ -0.43
RNF4-218ENST00000513284 EML5Q05BV3 1969 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 PRRG1O14668 218 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 CHADO15335 359 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 CTHP32929 405 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 MPLP40238 635 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 RBM25P49756 843 aaKnown RBP12.36□□□□□ -0.43
RNF4-218ENST00000513284 KPNA1P52294 538 aaPredicted RBP12.36□□□□□ -0.43
RNF4-218ENST00000513284 CYP4A11Q02928 519 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 ZNF252P-AS1Q0IIN9 211 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 PON2Q15165 354 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 TEAD2Q15562 447 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 EEF1DP3Q658K8 133 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 PPP4R3CPQ6ZMV5 832 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 ANKS3Q6ZW76 656 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 TPH2Q8IWU9 490 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 BLIDQ8IZY5 108 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 SHKBP1Q8TBC3 707 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 BRF1Q92994 677 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms