RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 NAB2Q15742 525 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 NOMO2Q5JPE7 1267 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 GLRA4Q5JXX5 417 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 TDRD10Q5VZ19 366 aaKnown RBP13.54□□□□□ -0.24
PDPN-210ENST00000513143 TRAPPC11Q7Z392 1133 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 C1orf127Q8N9H9 656 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 BEST2Q8NFU1 509 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 HELQQ8TDG4 1101 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 FAM84AQ96KN4 292 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 CASD1Q96PB1 797 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 SLC38A7Q9NVC3 462 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 KANSL3Q9P2N6 904 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 UBQLN1Q9UMX0 589 aaKnown RBP13.54□□□□□ -0.24
PDPN-210ENST00000513143 PLAGL2Q9UPG8 496 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.54□□□□□ -0.24
PDPN-210ENST00000513143 A0A1W2PQC6 194 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 DGKIO75912 1065 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 VNN1O95497 513 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 PBX1P40424 430 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 MAGEA10P43363 369 aaPredicted RBP13.53□□□□□ -0.24
PDPN-210ENST00000513143 ZNF75DP51815 510 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 KCNMA1Q12791 1236 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 CETN1Q12798 172 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 GRIK3Q13003 919 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 EPC2Q52LR7 807 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 ABI1Q8IZP0 508 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 FBXL13Q8NEE6 735 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 CXorf38Q8TB03 319 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 URGCPQ8TCY9 931 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 C18orf25Q96B23 403 aaPredicted RBP13.53□□□□□ -0.24
PDPN-210ENST00000513143 ERGIC2Q96RQ1 377 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 DPP3Q9NY33 737 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 ITGA11Q9UKX5 1188 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 INPP5FQ9Y2H2 1132 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 SCN1AP35498 2009 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 CEP290O15078 2479 aa13.53□□□□□ -0.24
PDPN-210ENST00000513143 COL4A6Q14031 1691 aa13.52□□□□□ -0.24
PDPN-210ENST00000513143 ZBBXA8MT70 800 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 UPP2O95045 317 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 CST3P01034 146 aaPredicted RBP13.52□□□□□ -0.25
PDPN-210ENST00000513143 POMCP01189 267 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 GUCY2FP51841 1108 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 SOX4Q06945 474 aaPredicted RBP13.52□□□□□ -0.25
PDPN-210ENST00000513143 BIRC3Q13489 604 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 EXOC3L4Q17RC7 722 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 RASIP1Q5U651 963 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 SCARA3Q6AZY7 606 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 GBP6Q6ZN66 633 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 LMO3Q8TAP4 145 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 TAS1R2Q8TE23 839 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 SEMA4DQ92854 862 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 ZNF689Q96CS4 500 aaPredicted RBP13.52□□□□□ -0.25
PDPN-210ENST00000513143 MRFAP1L1Q96HT8 127 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 CRACR2AQ9BSW2 395 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 MTIF3Q9H2K0 278 aaKnown RBP13.52□□□□□ -0.25
PDPN-210ENST00000513143 TBC1D13Q9NVG8 400 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 RAB20Q9NX57 234 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 CXXC1Q9P0U4 656 aaPredicted RBP13.52□□□□□ -0.25
PDPN-210ENST00000513143 TUBGCP4Q9UGJ1 667 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 SIX4Q9UIU6 781 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 SIK3Q9Y2K2 1263 aa13.52□□□□□ -0.25
PDPN-210ENST00000513143 ANO9A1A5B4 782 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 PHACTR2O75167 634 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 ADCY5O95622 1261 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 HLA-DRAP01903 254 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 ITGB3P05106 788 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 PON1P27169 355 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 LRPAP1P30533 357 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 GATMP50440 423 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 RBP5P82980 135 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 DSC1Q08554 894 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 TUSC3Q13454 348 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 NCOA4Q13772 614 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 SYCP1Q15431 976 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 DPY19L2P1Q6NXN4 242 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 TMEM130Q8N3G9 435 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 EHBP1Q8NDI1 1231 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 PHOSPHO2Q8TCD6 241 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 SLC9A7Q96T83 725 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 MRPL9Q9BYD2 267 aaKnown RBP13.51□□□□□ -0.25
PDPN-210ENST00000513143 RC3H2Q9HBD1 1191 aaKnown RBP13.51□□□□□ -0.25
PDPN-210ENST00000513143 GCNT4Q9P109 453 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 SLC4A7Q9Y6M7 1214 aa13.51□□□□□ -0.25
PDPN-210ENST00000513143 TBKBP1A7MCY6 615 aa13.5□□□□□ -0.25
PDPN-210ENST00000513143 PIRO00625 290 aa13.5□□□□□ -0.25
PDPN-210ENST00000513143 GALR2O43603 387 aaPredicted RBP13.5□□□□□ -0.25
PDPN-210ENST00000513143 LRRN2O75325 713 aa13.5□□□□□ -0.25
PDPN-210ENST00000513143 SLC9A1P19634 815 aa13.5□□□□□ -0.25
PDPN-210ENST00000513143 POLR2BP30876 1174 aaKnown RBP13.5□□□□□ -0.25
PDPN-210ENST00000513143 RPL9P32969 192 aaKnown RBP13.5□□□□□ -0.25
PDPN-210ENST00000513143 PIK3CAP42336 1068 aa13.5□□□□□ -0.25
PDPN-210ENST00000513143 TRPC3Q13507 836 aa13.5□□□□□ -0.25
PDPN-210ENST00000513143 PTPN21Q16825 1174 aa13.5□□□□□ -0.25
PDPN-210ENST00000513143 C9orf57Q5W0N0 161 aa13.5□□□□□ -0.25
PDPN-210ENST00000513143 TMCO2Q7Z6W1 182 aaPredicted RBP13.5□□□□□ -0.25
PDPN-210ENST00000513143 VSTM4Q8IW00 320 aa13.5□□□□□ -0.25
PDPN-210ENST00000513143 DDX27Q96GQ7 796 aaKnown RBP13.5□□□□□ -0.25
PDPN-210ENST00000513143 UROC1Q96N76 676 aa13.5□□□□□ -0.25
PDPN-210ENST00000513143 GDF15Q99988 308 aa13.5□□□□□ -0.25
PDPN-210ENST00000513143 INTS2Q9H0H0 1204 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms