RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 DNASE1L2Q92874 299 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 KCNN1Q92952 543 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 ELSPBP1Q96BH3 223 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 TSPAN18Q96SJ8 248 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 TCHPQ9BT92 498 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 IER2Q9BTL4 223 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 FAM126AQ9BYI3 521 aaPredicted RBP13.77□□□□□ -0.21
VEGFA-216ENST00000512683 PLEKHA5Q9HAU0 1116 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 KCND2Q9NZV8 630 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 CACNG4Q9UBN1 327 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 PCDHGA2Q9Y5H1 932 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 DMDP11532 3685 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 CFAP54Q96N23 3096 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 MAN2B1O00754 1011 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 KINO60870 393 aaKnown RBP13.76□□□□□ -0.21
VEGFA-216ENST00000512683 TOM1L1O75674 476 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 LRG1P02750 347 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 RHOP08100 348 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 GLULP15104 373 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 GUCY2CP25092 1073 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 SMTNP53814 917 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 MLLT6P55198 1093 aaPredicted RBP13.76□□□□□ -0.21
VEGFA-216ENST00000512683 PTGDRQ13258 359 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 KYAT1Q16773 422 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 VARS2Q5ST30 1063 aaKnown RBP13.76□□□□□ -0.21
VEGFA-216ENST00000512683 MPZL3Q6UWV2 235 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 ZPBP2Q6X784 338 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 DTHD1Q6ZMT9 781 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 C1orf186Q6ZWK4 172 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 ELMOD1Q8N336 334 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 SNX29Q8TEQ0 813 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 TMX3Q96JJ7 454 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 GPR88Q9GZN0 384 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 CDT1Q9H211 546 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 CXCL16Q9H2A7 254 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 KMT5AQ9NQR1 393 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 DDX19AQ9NUU7 478 aaKnown RBP13.76□□□□□ -0.21
VEGFA-216ENST00000512683 CNTN3Q9P232 1028 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 KIF3AQ9Y496 699 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 TRIP11Q15643 1979 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 DENND4AQ7Z401 1863 aa13.76□□□□□ -0.21
VEGFA-216ENST00000512683 MYH11P35749 1972 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 H0YCG3 227 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 PODXLO00592 558 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 PRRG1O14668 218 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 SLC26A4O43511 780 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 EDN1P05305 212 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 TKTP29401 623 aaKnown RBP13.75□□□□□ -0.21
VEGFA-216ENST00000512683 ROR1Q01973 937 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 STRN3Q13033 797 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 PUM1Q14671 1186 aaKnown RBP eCLIP13.75□□□□□ -0.21
VEGFA-216ENST00000512683 ZNF568Q3ZCX4 644 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 GLRA4Q5JXX5 417 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 CYP4A22Q5TCH4 519 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 IQCEQ6IPM2 695 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 RINT1Q6NUQ1 792 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 MAML2Q8IZL2 1156 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-216ENST00000512683 ATRIPQ8WXE1 791 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 E2F7Q96AV8 911 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 SUSD3Q96L08 255 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 KIFC3Q9BVG8 833 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 FOXQ1Q9C009 403 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 ZFP14Q9HCL3 533 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 LTB4R2Q9NPC1 389 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 AFF4Q9UHB7 1163 aaKnown RBP13.75□□□□□ -0.21
VEGFA-216ENST00000512683 USP20Q9Y2K6 914 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 NUB1Q9Y5A7 615 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 PCDHB6Q9Y5E3 794 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 R4GN57 208 aa13.75□□□□□ -0.21
VEGFA-216ENST00000512683 MARCKSP29966 332 aaPredicted RBP13.74□□□□□ -0.21
VEGFA-216ENST00000512683 BRCC3P46736 316 aa13.74□□□□□ -0.21
VEGFA-216ENST00000512683 ADCY1Q08828 1119 aa13.74□□□□□ -0.21
VEGFA-216ENST00000512683 UBXN2BQ14CS0 331 aa13.74□□□□□ -0.21
VEGFA-216ENST00000512683 IL17AQ16552 155 aa13.74□□□□□ -0.21
VEGFA-216ENST00000512683 HYIQ5T013 277 aa13.74□□□□□ -0.21
VEGFA-216ENST00000512683 C1orf228Q6PIY5 440 aa13.74□□□□□ -0.21
VEGFA-216ENST00000512683 DAW1Q8N136 415 aa13.74□□□□□ -0.21
VEGFA-216ENST00000512683 SUMF1Q8NBK3 374 aa13.74□□□□□ -0.21
VEGFA-216ENST00000512683 ZBTB44Q8NCP5 570 aa13.74□□□□□ -0.21
VEGFA-216ENST00000512683 NELL1Q92832 810 aa13.74□□□□□ -0.21
VEGFA-216ENST00000512683 IRF7Q92985 503 aa13.74□□□□□ -0.21
VEGFA-216ENST00000512683 SECISBP2LQ93073 1101 aaKnown RBP13.74□□□□□ -0.21
VEGFA-216ENST00000512683 MCRS1Q96EZ8 462 aa13.74□□□□□ -0.21
VEGFA-216ENST00000512683 ZNF512Q96ME7 567 aaPredicted RBP13.74□□□□□ -0.21
VEGFA-216ENST00000512683 TARS2Q9BW92 718 aaKnown RBP13.74□□□□□ -0.21
VEGFA-216ENST00000512683 TRPV4Q9HBA0 871 aa13.74□□□□□ -0.21
VEGFA-216ENST00000512683 CYP4F11Q9HBI6 524 aa13.74□□□□□ -0.21
VEGFA-216ENST00000512683 SPATA6Q9NWH7 488 aaPredicted RBP13.74□□□□□ -0.21
VEGFA-216ENST00000512683 HCFC1R1Q9NWW0 138 aa13.74□□□□□ -0.21
VEGFA-216ENST00000512683 ZSCAN32Q9NX65 697 aa13.74□□□□□ -0.21
VEGFA-216ENST00000512683 WDR27A2RRH5 827 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 ABLIM1O14639 778 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 CLDN3O15551 220 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 HIP1RO75146 1068 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 OAZ2O95190 189 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 PLS3P13797 630 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 CYP3A5P20815 502 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 ABCD1P33897 745 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 NRLP54845 237 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 SOX4Q06945 474 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms