RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 GLUD1P00367 558 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 C1RP00736 705 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 ADH1AP07327 375 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 MCF2P10911 925 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 PLS3P13797 630 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 PLCG1P19174 1290 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 SYT1P21579 422 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 LONP1P36776 959 aaKnown RBP6.38□□□□□ -1.39
RNF4-217ENST00000511892 PLA2G5P39877 138 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 CLCNKBP51801 687 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 OSTNP61366 133 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 SIGLEC14Q08ET2 396 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 RESTQ13127 1097 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 MCM6Q14566 821 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 KARSQ15046 597 aaKnown RBP6.38□□□□□ -1.39
RNF4-217ENST00000511892 UPP1Q16831 310 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 FAM171A1Q5VUB5 890 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 FAM173BQ6P4H8 233 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 PRSS55Q6UWB4 352 aaPredicted RBP6.38□□□□□ -1.39
RNF4-217ENST00000511892 C15orf39Q6ZRI6 1047 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 BMP8AQ7Z5Y6 402 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 ZBTB33Q86T24 672 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 PALB2Q86YC2 1186 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 GLYCTKQ8IVS8 523 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 GPR65Q8IYL9 337 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 ZDHHC14Q8IZN3 488 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 TMEM130Q8N3G9 435 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 C3orf58Q8NDZ4 430 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 LNX1Q8TBB1 728 aaPredicted RBP6.38□□□□□ -1.39
RNF4-217ENST00000511892 HDAC7Q8WUI4 952 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 RIN2Q8WYP3 895 aaPredicted RBP6.38□□□□□ -1.39
RNF4-217ENST00000511892 RAD54LQ92698 747 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 KCNN1Q92952 543 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 ZNF707Q96C28 371 aaPredicted RBP6.38□□□□□ -1.39
RNF4-217ENST00000511892 ASIC4Q96FT7 647 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 EPSTI1Q96J88 318 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 CLSTN3Q9BQT9 956 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 TTPALQ9BTX7 342 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 MRPL4Q9BYD3 311 aaKnown RBP6.38□□□□□ -1.39
RNF4-217ENST00000511892 SMOC2Q9H3U7 446 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 GOLGA2P5Q9HBQ8 144 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.38□□□□□ -1.39
RNF4-217ENST00000511892 KCND2Q9NZV8 630 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 LIMD1Q9UGP4 676 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 MTMR6Q9Y217 621 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 HCN4Q9Y3Q4 1203 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 ARIH1Q9Y4X5 557 aaPredicted RBP6.38□□□□□ -1.39
RNF4-217ENST00000511892 SF3B1O75533 1304 aaKnown RBP eCLIP6.38□□□□□ -1.392e-6■■■■■ 112
RNF4-217ENST00000511892 CFAP54Q96N23 3096 aa6.38□□□□□ -1.39
RNF4-217ENST00000511892 ZNF638Q14966 1978 aaKnown RBP6.37□□□□□ -1.39
RNF4-217ENST00000511892 MIA3Q5JRA6 1907 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 TMEM189-UBE2V1I3L0A0 370 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 I3L4J1 428 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 N4BP1O75113 896 aaKnown RBP6.37□□□□□ -1.39
RNF4-217ENST00000511892 TOM1L1O75674 476 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 BMP15O95972 392 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 ASGR2P07307 311 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 HARSP12081 509 aaKnown RBP6.37□□□□□ -1.39
RNF4-217ENST00000511892 KCNE1P15382 129 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 FGFR3P22607 806 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 UBA7P41226 1012 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 ZNF131P52739 623 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 SMTNP53814 917 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 NCKAP1LP55160 1127 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 DHX8Q14562 1220 aaKnown RBP6.37□□□□□ -1.39
RNF4-217ENST00000511892 PSMD5Q16401 504 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 SLC10A6Q3KNW5 377 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 ZNF568Q3ZCX4 644 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 SEZ6Q53EL9 994 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 SPECC1Q5M775 1068 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 SWT1Q5T5J6 900 aaKnown RBP6.37□□□□□ -1.39
RNF4-217ENST00000511892 DCLRE1AQ6PJP8 1040 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 MPZL3Q6UWV2 235 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 RSPO2Q6UXX9 243 aaPredicted RBP6.37□□□□□ -1.39
RNF4-217ENST00000511892 HAUS6Q7Z4H7 955 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 APBB1IPQ7Z5R6 666 aaPredicted RBP6.37□□□□□ -1.39
RNF4-217ENST00000511892 GPBP1Q86WP2 473 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 CEP57Q86XR8 500 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 KREMEN2Q8NCW0 462 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 PIK3R5Q8WYR1 880 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 C18orf25Q96B23 403 aaPredicted RBP6.37□□□□□ -1.39
RNF4-217ENST00000511892 CALML4Q96GE6 196 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 CDK5RAP3Q96JB5 506 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 SNX27Q96L92 541 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 CLIC6Q96NY7 704 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 ACAP3Q96P50 834 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 FIZ1Q96SL8 496 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 REEP2Q9BRK0 252 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 CCDC94Q9BW85 323 aaPredicted RBP6.37□□□□□ -1.39
RNF4-217ENST00000511892 RHOBTB2Q9BYZ6 727 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 CCSER1Q9C0I3 900 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 CNTN3Q9P232 1028 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 FBXO2Q9UK22 296 aaPredicted RBP6.37□□□□□ -1.39
RNF4-217ENST00000511892 FBXW11Q9UKB1 542 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 USTQ9Y2C2 406 aa6.37□□□□□ -1.39
RNF4-217ENST00000511892 ZFHX2Q9C0A1 2572 aaPredicted RBP6.36□□□□□ -1.39
RNF4-217ENST00000511892 CACNA1IQ9P0X4 2223 aa6.36□□□□□ -1.39
RNF4-217ENST00000511892 PODXLO00592 558 aa6.36□□□□□ -1.39
RNF4-217ENST00000511892 TRAK2O60296 914 aa6.36□□□□□ -1.39
RNF4-217ENST00000511892 FAM189A1O60320 539 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms