RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 CMASQ8NFW8 434 aaPredicted RBP12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 RPGRIP1Q96KN7 1286 aa12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 NECTIN4Q96NY8 510 aa12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 LRRC27Q9C0I9 530 aa12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 RPF1Q9H9Y2 349 aaKnown RBP12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 VWA8A3KMH1 1905 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 ADAM12O43184 909 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 GCNT3O95395 438 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 PAPLNO95428 1278 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 SPATA31D3P0C874 917 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 TKTP29401 623 aaKnown RBP12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 PPP2R3AQ06190 1150 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 ATAT1Q5SQI0 421 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 ADALQ6DHV7 355 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 SPATA31D4Q6ZUB0 917 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 CCDC65Q8IXS2 484 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 HDAC7Q8WUI4 952 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 LEO1Q8WVC0 666 aaPredicted RBP12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 KIF12Q96FN5 646 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 RIPOR3Q96MK2 946 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 ACCSQ96QU6 501 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 C7orf25Q9BPX7 421 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 FAM13BQ9NYF5 915 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 AGO2Q9UKV8 859 aaKnown RBP12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 PCDHB13Q9Y5F0 798 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 DCXO43602 365 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 TRAPPC3O43617 180 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 CYP3A5P20815 502 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 LRPAP1P30533 357 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 ACOT2P49753 483 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 AMPD3Q01432 767 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 ALCAMQ13740 583 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 POSTNQ15063 836 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 PDXDC1Q6P996 788 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 CRELD2Q6UXH1 353 aaPredicted RBP12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 RSPO2Q6UXX9 243 aaPredicted RBP12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 C15orf39Q6ZRI6 1047 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 CD302Q8IX05 232 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 GLIS3Q8NEA6 775 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 HPS3Q969F9 1004 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 TSPAN18Q96SJ8 248 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 C1QTNF1Q9BXJ1 281 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 RHOBTB2Q9BYZ6 727 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 PLEKHA4Q9H4M7 779 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 MAGEF1Q9HAY2 307 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 C11orf16Q9NQ32 467 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 MTRRQ9UBK8 725 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 DPP7Q9UHL4 492 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 KCNH3Q9ULD8 1083 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 UBQLN1Q9UMX0 589 aaKnown RBP12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 EXOC7Q9UPT5 735 aa12.64□□□□□ -0.39
SH3RF1-205ENST00000511421 PLXNA3P51805 1871 aa12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 CCDC195A0A1B0GUA6 201 aa12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 SYN3O14994 580 aa12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 RFPL2O75678 378 aa12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 PRPF6O94906 941 aaKnown RBP12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 ALADP13716 330 aa12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 GUCY2FP51841 1108 aa12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 KRT85P78386 507 aa12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 POU5F1Q01860 360 aaKnown RBP12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 BECN1Q14457 450 aa12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 KREMEN2Q8NCW0 462 aa12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 POMGNT1Q8WZA1 660 aa12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 ZNF707Q96C28 371 aaPredicted RBP12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 SUSD3Q96L08 255 aa12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 SPATA32Q96LK8 384 aa12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 MUTYHQ9UIF7 546 aa12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 FBXW11Q9UKB1 542 aa12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 BACE2Q9Y5Z0 518 aa12.63□□□□□ -0.39
SH3RF1-205ENST00000511421 SPDYE4A6NLX3 237 aa12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 TBC1D4O60343 1298 aa12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 SP100P23497 879 aaPredicted RBP12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 CMA1P23946 247 aa12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 CASP1P29466 404 aa12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 ASIC1P78348 528 aa12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 EHHADHQ08426 723 aa12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 RAB33AQ14088 237 aa12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 MRPL58Q14197 206 aaKnown RBP12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 SPATA1Q5VX52 437 aa12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 JADE1Q6IE81 842 aa12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 ELMSAN1Q6PJG2 1045 aa12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 ANKS3Q6ZW76 656 aa12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 ZSWIM2Q8NEG5 633 aa12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 FAM212AQ96EL1 285 aa12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 BLZF1Q9H2G9 400 aa12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 ASB7Q9H672 318 aa12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 NUB1Q9Y5A7 615 aa12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 PDCD11Q14690 1871 aaKnown RBP12.62□□□□□ -0.39
SH3RF1-205ENST00000511421 C2CD4DB7Z1M9 353 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 PPEF2O14830 753 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 XPOTO43592 962 aaKnown RBP12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 ACTN4O43707 911 aaKnown RBP12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 ZMYND10O75800 440 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 NFICP08651 508 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 GARTP22102 1010 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 OR1D2P34982 312 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 HOXD13P35453 343 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 AARSP49588 968 aaKnown RBP eCLIP12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 VARS2Q5ST30 1063 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms