RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 RASGEF1CQ8N431 466 aa15.77■□□□□ 0.12
USP38-202ENST00000510377 RMDN3Q96TC7 470 aa15.77■□□□□ 0.12
USP38-202ENST00000510377 GABBR1Q9UBS5 961 aa15.77■□□□□ 0.12
USP38-202ENST00000510377 GINS2Q9Y248 185 aa15.77■□□□□ 0.12
USP38-202ENST00000510377 F5H423 210 aaPredicted RBP15.77■□□□□ 0.12
USP38-202ENST00000510377 ATP5HO75947 161 aa15.77■□□□□ 0.12
USP38-202ENST00000510377 MARSP56192 900 aaKnown RBP15.77■□□□□ 0.12
USP38-202ENST00000510377 TMPRSS15P98073 1019 aa15.77■□□□□ 0.12
USP38-202ENST00000510377 RRP1BQ14684 758 aaKnown RBP15.77■□□□□ 0.12
USP38-202ENST00000510377 DPY19L2Q6NUT2 758 aa15.77■□□□□ 0.12
USP38-202ENST00000510377 DARS2Q6PI48 645 aaKnown RBP15.77■□□□□ 0.12
USP38-202ENST00000510377 SDCCAG8Q86SQ7 713 aaPredicted RBP15.77■□□□□ 0.12
USP38-202ENST00000510377 AGBL1Q96MI9 1066 aa15.77■□□□□ 0.12
USP38-202ENST00000510377 SLC13A1Q9BZW2 595 aa15.77■□□□□ 0.12
USP38-202ENST00000510377 BATF3Q9NR55 127 aa15.77■□□□□ 0.12
USP38-202ENST00000510377 KCNQ5Q9NR82 932 aa15.77■□□□□ 0.12
USP38-202ENST00000510377 CNOT7Q9UIV1 285 aaKnown RBP15.77■□□□□ 0.12
USP38-202ENST00000510377 RNF8O76064 485 aa15.77■□□□□ 0.11
USP38-202ENST00000510377 PSMA2P25787 234 aa15.77■□□□□ 0.11
USP38-202ENST00000510377 XRCC4Q13426 336 aa15.77■□□□□ 0.11
USP38-202ENST00000510377 CDO1Q16878 200 aa15.77■□□□□ 0.11
USP38-202ENST00000510377 MCF2L2Q86YR7 1114 aa15.77■□□□□ 0.11
USP38-202ENST00000510377 MASTLQ96GX5 879 aa15.77■□□□□ 0.11
USP38-202ENST00000510377 SMYD3Q9H7B4 428 aa15.77■□□□□ 0.11
USP38-202ENST00000510377 METTL5Q9NRN9 209 aaKnown RBP15.77■□□□□ 0.11
USP38-202ENST00000510377 MAP3K7O43318 606 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 TOM1L1O75674 476 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 NUDT17P0C025 328 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 CNGA1P29973 690 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 PPATQ06203 517 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 KRT81Q14533 505 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 SMTNL2Q2TAL5 461 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 LGSNQ5TDP6 509 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 C11orf63Q6NUN7 778 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 N4BP2Q86UW6 1770 aaPredicted RBP15.76■□□□□ 0.11
USP38-202ENST00000510377 PPM1NQ8N819 430 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 KCTD6Q8NC69 237 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 CNTNAP4Q9C0A0 1308 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 KCNH7Q9NS40 1196 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 NINJ2Q9NZG7 142 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 G3BP2Q9UN86 482 aaKnown RBP15.76■□□□□ 0.11
USP38-202ENST00000510377 C4AP0C0L4 1744 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 C4BP0C0L5 1744 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 TMEM191BP0C7N4 346 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 KRT4P19013 534 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 SERPINB6P35237 376 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 ARL4CP56559 192 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 ACAD10Q6JQN1 1059 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 OTOP1Q7RTM1 612 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 FAM81BQ96LP2 452 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 MSTO1Q9BUK6 570 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 RXFP1Q9HBX9 757 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 SLCO1B3Q9NPD5 702 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 DLGAP2Q9P1A6 1054 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 PIM2Q9P1W9 311 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 K7ERI5 159 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 ZSCAN5DPP0CG00 497 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 NCALDP61601 193 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 HIF1AQ16665 826 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 LRRC36Q1X8D7 754 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 Q4G0T1 1027 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 SEZ6Q53EL9 994 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 SPOPLQ6IQ16 392 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 TMEM154Q6P9G4 183 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 ETNPPLQ8TBG4 499 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 ATP6V0A1Q93050 837 aa15.76■□□□□ 0.11
USP38-202ENST00000510377 SRRM3A6NNA2 597 aaPredicted RBP15.75■□□□□ 0.11
USP38-202ENST00000510377 H0YGN5 161 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 ECE2O60344 883 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 VCAM1P19320 739 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 KDSRQ06136 332 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 RC3H1Q5TC82 1133 aaKnown RBP15.75■□□□□ 0.11
USP38-202ENST00000510377 SWSAP1Q6NVH7 229 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 C1orf186Q6ZWK4 172 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 RBM41Q96IZ5 413 aaKnown RBP15.75■□□□□ 0.11
USP38-202ENST00000510377 LRRC4CQ9HCJ2 640 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 NFS1Q9Y697 457 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 SCINQ9Y6U3 715 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 RNASELQ05823 741 aaKnown RBP15.75■□□□□ 0.11
USP38-202ENST00000510377 AGGF1Q8N302 714 aaeCLIP15.75■□□□□ 0.11
USP38-202ENST00000510377 EPS8L1Q8TE68 723 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 CENPTQ96BT3 561 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 SIX2Q9NPC8 291 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.75■□□□□ 0.11
USP38-202ENST00000510377 MCF2LO15068 1137 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 LPXNO60711 386 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 DKC1O60832 514 aaKnown RBP eCLIP15.75■□□□□ 0.11
USP38-202ENST00000510377 IL1R1P14778 569 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 EPHB2P29323 1055 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 NR1H3Q13133 447 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 ANKRD20A2Q5SQ80 823 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 ANKRD20A1Q5TYW2 823 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 DCAF12L1Q5VU92 463 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 LRRC4BQ9NT99 713 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 MAGED2Q9UNF1 606 aaPredicted RBP15.75■□□□□ 0.11
USP38-202ENST00000510377 ZHX2Q9Y6X8 837 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 ATXN2Q99700 1313 aaKnown RBP15.75■□□□□ 0.11
USP38-202ENST00000510377 MOXD1Q6UVY6 613 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 SP8Q8IXZ3 490 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 SMC1BQ8NDV3 1235 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms