RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 FKBP1BP68106 108 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 NOP14P78316 857 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 GPC5P78333 572 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 CCNA1P78396 465 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 MRPS25P82663 173 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 SLC7A5Q01650 507 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 POU5F1Q01860 360 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 CENPCQ03188 943 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 ARHGAP1Q07960 439 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 LAMTOR4Q0VGL1 99 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 GPS2Q13227 327 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 BIRC3Q13489 604 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 CUL2Q13617 745 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 TFDP1Q14186 410 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 CLUL1Q15846 466 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 PTPROQ16827 1216 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 ZNF792Q3KQV3 632 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 EAPPQ56P03 285 aaPredicted RBP5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 WDR44Q5JSH3 913 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 SND1Q7KZF4 910 aaKnown RBP eCLIP5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 ANKRD23Q86SG2 305 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 PNMA8AQ86V59 439 aaPredicted RBP5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 WDR49Q8IV35 697 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 ZBTB8OSQ8IWT0 167 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 IFT20Q8IY31 132 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 DHX37Q8IY37 1157 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 MREGQ8N565 214 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 LINC01465Q8N7H1 131 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 GPRC5AQ8NFJ5 357 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 OR5B17Q8NGF7 314 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 PPTC7Q8NI37 304 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 ZNF564Q8TBZ8 553 aaPredicted RBP5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 PRPF31Q8WWY3 499 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 CASKIN2Q8WXE0 1202 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 BRI3BPQ8WY22 251 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.11□□□□□ -1.595e-8■■■■■ 65.3
PDLIM5-214ENST00000510099 SEC14L1Q92503 715 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 ALG3Q92685 438 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 GLG1Q92896 1179 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 COPS5Q92905 334 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 CD101Q93033 1021 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 TATDN2Q93075 761 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 EMID1Q96A84 441 aaPredicted RBP5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 ZNF775Q96BV0 537 aaPredicted RBP5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 ZNF653Q96CK0 615 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 TRIM11Q96F44 468 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 ZBTB45Q96K62 511 aaPredicted RBP5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 RNPC3Q96LT9 517 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 RPS6KC1Q96S38 1066 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 KRT12Q99456 494 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 ACO2Q99798 780 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 ZSWIM1Q9BR11 485 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 PI4K2AQ9BTU6 479 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 NUP85Q9BW27 656 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 NFKBIZQ9BYH8 718 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 KATNBL1Q9H079 304 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 SMARCAD1Q9H4L7 1026 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 SLITRK6Q9H5Y7 841 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 EFCC1Q9HA90 598 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 APOBEC3GQ9HC16 384 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 ACP6Q9NPH0 428 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 AVENQ9NQS1 362 aaPredicted RBP5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 PRDM10Q9NQV6 1147 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.11□□□□□ -1.592e-6■■■■■ 86.5
PDLIM5-214ENST00000510099 UVRAGQ9P2Y5 699 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 MORF4L1Q9UBU8 362 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 CNTN6Q9UQ52 1028 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 PCDHB2Q9Y5E7 798 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 UMODL1Q5DID0 1318 aa5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 POLR2AP24928 1970 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-214ENST00000510099 CCL15-CCL14A0A0B4J2E2 113 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 GOLGA6L10A0A0M3HER8 536 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 ESYT3A0FGR9 886 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 ZSCAN5CA6NGD5 496 aaPredicted RBP5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 PDHXO00330 501 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 KRIT1O00522 736 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 ACKR2O00590 384 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 CLDN3O15551 220 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 ASS1P00966 412 aaKnown RBP5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 GH1P01241 217 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 FGGP02679 453 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 CYP1A1P04798 512 aaPredicted RBP5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 LGALS2P05162 132 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 COL1A2P08123 1366 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 HOXC6P09630 235 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 HARSP12081 509 aaKnown RBP5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 UNGP13051 313 aaPredicted RBP5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 ITGA4P13612 1032 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 HSPA6P17066 643 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 TNNI1P19237 187 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 COMTP21964 271 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 ADORA2AP29274 412 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 ECHS1P30084 290 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 CTNNA1P35221 906 aaKnown RBP5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 TNFSF9P41273 254 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 GCLCP48506 637 aaPredicted RBP5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 MARCKSL1P49006 195 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 CARSP49589 748 aaKnown RBP5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 CLCN3P51790 818 aa5.1□□□□□ -1.59
PDLIM5-214ENST00000510099 GTF2A2P52657 109 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms