RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 HPS3Q969F9 1004 aa17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 PHF7Q9BWX1 381 aaPredicted RBP17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 EPHX3Q9H6B9 360 aa17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 SERTAD1Q9UHV2 236 aa17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 CDH22Q9UJ99 828 aa17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 AGO2Q9UKV8 859 aaKnown RBP17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 EXOC7Q9UPT5 735 aa17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 FAM237AA0A1B0GTK4 181 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 A0A1B0GVL5 298 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 LOC730098B7Z3J9 87 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 I3L4J1 428 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 TGM5O43548 720 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 TRAPPC3O43617 180 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 SLFN14P0C7P3 912 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 SPATA31D3P0C874 917 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 CYP3A5P20815 502 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 CASP1P29466 404 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 LRPAP1P30533 357 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 SSTR3P32745 418 aaPredicted RBP17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 HOXD13P35453 343 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 EHHADHQ08426 723 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 ALCAMQ13740 583 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 CBX2Q14781 532 aaPredicted RBP17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 ATAT1Q5SQI0 421 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 RARS2Q5T160 578 aaKnown RBP17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 CES5AQ6NT32 575 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 SPATA31D4Q6ZUB0 917 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 GLIS3Q8NEA6 775 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 ZNF507Q8TCN5 953 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 HDAC7Q8WUI4 952 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 PYM1Q9BRP8 204 aaKnown RBP17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 SCAND2PQ9GZW5 306 aaPredicted RBP17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 BLZF1Q9H2G9 400 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 MAGEF1Q9HAY2 307 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 HPSEQ9Y251 543 aa17.56■□□□□ 0.4
PDLIM5-212ENST00000509333 CITO14578 2027 aa17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 PVALEFA0A1B0GWK0 134 aa17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 PI4K2BG5E9Z4 385 aa17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 ADAM12O43184 909 aa17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 ACTN4O43707 911 aaKnown RBP17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 WEE2P0C1S8 567 aa17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 AFMP43652 599 aa17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 CUL4BQ13620 913 aa17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 MRPL58Q14197 206 aaKnown RBP17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 RSPO2Q6UXX9 243 aaPredicted RBP17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 TMC5Q6UXY8 1006 aa17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 EPM2AIP1Q7L775 607 aaPredicted RBP17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 GPR149Q86SP6 731 aa17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 ZSWIM2Q8NEG5 633 aa17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 POMGNT1Q8WZA1 660 aa17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 KIF12Q96FN5 646 aa17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 PAGE5Q96GU1 130 aa17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 ASB7Q9H672 318 aa17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 TUBGCP4Q9UGJ1 667 aa17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 UBQLN1Q9UMX0 589 aaKnown RBP17.55■□□□□ 0.4
PDLIM5-212ENST00000509333 TBC1D4O60343 1298 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 PAPLNO95428 1278 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 GLUD1P00367 558 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 PFKFB1P16118 471 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 GARTP22102 1010 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 TKTP29401 623 aaKnown RBP17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 MTHFRP42898 656 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 ASIC1P78348 528 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 NUCB2P80303 420 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 CREMQ03060 361 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 PPP2R3AQ06190 1150 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 RAB33AQ14088 237 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 PSMD5Q16401 504 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 SPATA1Q5VX52 437 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 PDXDC1Q6P996 788 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 UNC13DQ70J99 1090 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 GLYCTKQ8IVS8 523 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 SYCP3Q8IZU3 236 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 CMASQ8NFW8 434 aaPredicted RBP17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 FAM212AQ96EL1 285 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 NECTIN4Q96NY8 510 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 POP1Q99575 1024 aaKnown RBP17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 PLEKHA4Q9H4M7 779 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 TMEM206Q9H813 350 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 BACE2Q9Y5Z0 518 aa17.54■□□□□ 0.4
PDLIM5-212ENST00000509333 TCHHQ07283 1943 aa17.53■□□□□ 0.4
PDLIM5-212ENST00000509333 A0A1W2PQ27 194 aa17.53■□□□□ 0.4
PDLIM5-212ENST00000509333 A0A1W2PQ64 194 aa17.53■□□□□ 0.4
PDLIM5-212ENST00000509333 A0A1W2PQD8 194 aa17.53■□□□□ 0.4
PDLIM5-212ENST00000509333 JADE1Q6IE81 842 aa17.53■□□□□ 0.4
PDLIM5-212ENST00000509333 GRAMD1CQ8IYS0 662 aa17.53■□□□□ 0.4
PDLIM5-212ENST00000509333 RPGRIP1Q96KN7 1286 aa17.53■□□□□ 0.4
PDLIM5-212ENST00000509333 SUSD3Q96L08 255 aa17.53■□□□□ 0.4
PDLIM5-212ENST00000509333 RIPOR3Q96MK2 946 aa17.53■□□□□ 0.4
PDLIM5-212ENST00000509333 POMKQ9H5K3 350 aa17.53■□□□□ 0.4
PDLIM5-212ENST00000509333 SFXN1Q9H9B4 322 aa17.53■□□□□ 0.4
PDLIM5-212ENST00000509333 MAN1C1Q9NR34 630 aa17.53■□□□□ 0.4
PDLIM5-212ENST00000509333 DPP7Q9UHL4 492 aa17.53■□□□□ 0.4
PDLIM5-212ENST00000509333 USP25Q9UHP3 1055 aa17.53■□□□□ 0.4
PDLIM5-212ENST00000509333 DERAQ9Y315 318 aa17.53■□□□□ 0.4
PDLIM5-212ENST00000509333 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 CCDC195A0A1B0GUA6 201 aa17.52■□□□□ 0.4
PDLIM5-212ENST00000509333 PIRO00625 290 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms