RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 GNA15P30679 374 aa15.95■□□□□ 0.14
PHF3-209ENST00000509330 RAP1GAPP47736 663 aa15.95■□□□□ 0.14
PHF3-209ENST00000509330 ACVR2BQ13705 512 aa15.95■□□□□ 0.14
PHF3-209ENST00000509330 TFDP1Q14186 410 aa15.95■□□□□ 0.14
PHF3-209ENST00000509330 DDX42Q86XP3 938 aaKnown RBP eCLIP15.95■□□□□ 0.14
PHF3-209ENST00000509330 RBBP8NLQ8NC74 664 aaPredicted RBP15.95■□□□□ 0.14
PHF3-209ENST00000509330 C16orf70Q9BSU1 422 aa15.95■□□□□ 0.14
PHF3-209ENST00000509330 IMPG2Q9BZV3 1241 aa15.95■□□□□ 0.14
PHF3-209ENST00000509330 TRIM31Q9BZY9 425 aa15.95■□□□□ 0.14
PHF3-209ENST00000509330 CDT1Q9H211 546 aa15.95■□□□□ 0.14
PHF3-209ENST00000509330 VTA1Q9NP79 307 aa15.95■□□□□ 0.14
PHF3-209ENST00000509330 NFU1Q9UMS0 254 aa15.95■□□□□ 0.14
PHF3-209ENST00000509330 ZC3H4Q9UPT8 1303 aaKnown RBP15.94■□□□□ 0.14
PHF3-209ENST00000509330 SPOPO43791 374 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 CLTAP09496 248 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 CYP2B6P20813 491 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 ABCD1P33897 745 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 PTENP60484 403 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 CLDN10P78369 228 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 PPFIA1Q13136 1202 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 TRPC3Q13507 836 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 KIZQ2M2Z5 673 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 MPZL3Q6UWV2 235 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 PPTC7Q8NI37 304 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 AMACRQ9UHK6 382 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 DOCK3Q8IZD9 2030 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 TARSL2A2RTX5 802 aaKnown RBP15.94■□□□□ 0.14
PHF3-209ENST00000509330 ACKR2O00590 384 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 ABLIM1O14639 778 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 DDX3YO15523 660 aaKnown RBP15.94■□□□□ 0.14
PHF3-209ENST00000509330 RRM1P23921 792 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.94■□□□□ 0.14
PHF3-209ENST00000509330 ZNF572Q7Z3I7 529 aaPredicted RBP15.94■□□□□ 0.14
PHF3-209ENST00000509330 RHOT2Q8IXI1 618 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 FLRT1Q9NZU1 646 aa15.94■□□□□ 0.14
PHF3-209ENST00000509330 CPSF3Q9UKF6 684 aaKnown RBP15.94■□□□□ 0.14
PHF3-209ENST00000509330 MAP2K7O14733 419 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 STRNO43815 780 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 ACO1P21399 889 aaKnown RBP15.93■□□□□ 0.14
PHF3-209ENST00000509330 GJC1P36383 396 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 GRB14Q14449 540 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 TAF1CQ15572 869 aaPredicted RBP15.93■□□□□ 0.14
PHF3-209ENST00000509330 PBKQ96KB5 322 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 RNPC3Q96LT9 517 aaKnown RBP15.93■□□□□ 0.14
PHF3-209ENST00000509330 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.93■□□□□ 0.14
PHF3-209ENST00000509330 C2orf40Q9H1Z8 148 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 MORF4L1Q9UBU8 362 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 POLIQ9UNA4 740 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 PLXNB2O15031 1838 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 NFICP08651 508 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 ZBTB48P10074 688 aaPredicted RBP15.93■□□□□ 0.14
PHF3-209ENST00000509330 SLC26A2P50443 739 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 MCL1Q07820 350 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 FAM110CQ1W6H9 321 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 CLEC16AQ2KHT3 1053 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 VTI1AQ96AJ9 217 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 FZD8Q9H461 694 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 ANAPC7Q9UJX3 599 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 DAAM1Q9Y4D1 1078 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 MMP3P08254 477 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 HOXC6P09630 235 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 FAM153BP0C7A2 387 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 BRD2P25440 801 aaKnown RBP15.93■□□□□ 0.14
PHF3-209ENST00000509330 GRIK4Q16099 956 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 FAM153CQ494X1 144 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 ACAD10Q6JQN1 1059 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 DPH6Q7L8W6 267 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 GTF3C2Q8WUA4 911 aaPredicted RBP15.93■□□□□ 0.14
PHF3-209ENST00000509330 JPH2Q9BR39 696 aaPredicted RBP15.93■□□□□ 0.14
PHF3-209ENST00000509330 ERVK-5Q9HDB9 667 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 FAM153AQ9UHL3 310 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 PCDHB2Q9Y5E7 798 aa15.93■□□□□ 0.14
PHF3-209ENST00000509330 HTTP42858 3142 aa15.92■□□□□ 0.14
PHF3-209ENST00000509330 KIAA0391O15091 583 aaKnown RBP15.92■□□□□ 0.14
PHF3-209ENST00000509330 NSFP46459 744 aaKnown RBP15.92■□□□□ 0.14
PHF3-209ENST00000509330 CDH8P55286 799 aa15.92■□□□□ 0.14
PHF3-209ENST00000509330 DUOXA2Q1HG44 320 aa15.92■□□□□ 0.14
PHF3-209ENST00000509330 KIAA0319LQ8IZA0 1049 aa15.92■□□□□ 0.14
PHF3-209ENST00000509330 SART1O43290 800 aaKnown RBP15.92■□□□□ 0.14
PHF3-209ENST00000509330 GAS2O43903 313 aaKnown RBP15.92■□□□□ 0.14
PHF3-209ENST00000509330 ZC3H11AO75152 810 aaKnown RBP eCLIP15.92■□□□□ 0.14
PHF3-209ENST00000509330 PHKA2P46019 1235 aa15.92■□□□□ 0.14
PHF3-209ENST00000509330 TNNC1P63316 161 aa15.92■□□□□ 0.14
PHF3-209ENST00000509330 BEX3Q00994 111 aa15.92■□□□□ 0.14
PHF3-209ENST00000509330 HLTFQ14527 1009 aaKnown RBP eCLIP15.92■□□□□ 0.146e-10■□□□□ 10.6
PHF3-209ENST00000509330 ZNF699Q32M78 642 aa15.92■□□□□ 0.14
PHF3-209ENST00000509330 MAP9Q49MG5 647 aa15.92■□□□□ 0.14
PHF3-209ENST00000509330 MTHFD1LQ6UB35 978 aa15.92■□□□□ 0.14
PHF3-209ENST00000509330 TSHZ1Q6ZSZ6 1077 aa15.92■□□□□ 0.14
PHF3-209ENST00000509330 WDR49Q8IV35 697 aa15.92■□□□□ 0.14
PHF3-209ENST00000509330 RPF1Q9H9Y2 349 aaKnown RBP15.92■□□□□ 0.14
PHF3-209ENST00000509330 RNF14Q9UBS8 474 aa15.92■□□□□ 0.14
PHF3-209ENST00000509330 PLXNA1Q9UIW2 1896 aa15.91■□□□□ 0.14
PHF3-209ENST00000509330 STAG3L1P0CL83 205 aa15.91■□□□□ 0.14
PHF3-209ENST00000509330 GZMAP12544 262 aa15.91■□□□□ 0.14
PHF3-209ENST00000509330 ARF4P18085 180 aaPredicted RBP15.91■□□□□ 0.14
PHF3-209ENST00000509330 TNFAIP2Q03169 654 aa15.91■□□□□ 0.14
PHF3-209ENST00000509330 MMS22LQ6ZRQ5 1243 aa15.91■□□□□ 0.14
PHF3-209ENST00000509330 CASKIN2Q8WXE0 1202 aa15.91■□□□□ 0.14
PHF3-209ENST00000509330 CXCL16Q9H2A7 254 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms