RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 IPPQ9Y573 584 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 RECQL4O94761 1208 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 EDN1P05305 212 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 GCLMP48507 274 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 MGAT3Q09327 533 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 ZBTB41Q5SVQ8 909 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 SLC39A4Q6P5W5 647 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 PDXDC1Q6P996 788 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 SLC24A5Q71RS6 500 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 APBB2Q92870 758 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 ANKRD36BP1Q96IX9 119 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 CRACR2AQ9BSW2 395 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 WNT8AQ9H1J5 351 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 DMAC2Q9NW81 257 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 SQORQ9Y6N5 450 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 LRRC53A6NM62 1247 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 FGBP02675 491 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 HOXA11P31270 313 aaPredicted RBP11.86□□□□□ -0.51
PROM1-207ENST00000508167 SURF1Q15526 300 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 ZSWIM2Q8NEG5 633 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 ZNF397Q8NF99 534 aaPredicted RBP11.86□□□□□ -0.51
PROM1-207ENST00000508167 SYT11Q9BT88 431 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 LUC7L2Q9Y383 392 aaKnown RBP11.86□□□□□ -0.51
PROM1-207ENST00000508167 JAM2P57087 298 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 MCL1Q07820 350 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 MBTPS1Q14703 1052 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 AMHR2Q16671 573 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 PAN2Q504Q3 1202 aaKnown RBP11.86□□□□□ -0.51
PROM1-207ENST00000508167 FAM26DQ5JW98 314 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 URGCPQ8TCY9 931 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 GAD1Q99259 594 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 NUP58Q9BVL2 599 aa11.86□□□□□ -0.51
PROM1-207ENST00000508167 XPOTO43592 962 aaKnown RBP11.85□□□□□ -0.51
PROM1-207ENST00000508167 ZNF572Q7Z3I7 529 aaPredicted RBP11.85□□□□□ -0.51
PROM1-207ENST00000508167 CCDC170Q8IYT3 715 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 POP1Q99575 1024 aaKnown RBP11.85□□□□□ -0.51
PROM1-207ENST00000508167 RNF216Q9NWF9 866 aaPredicted RBP11.85□□□□□ -0.51
PROM1-207ENST00000508167 MYO1AQ9UBC5 1043 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 PJA2O43164 708 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 PIGRP01833 764 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 TPM1P09493 284 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 CASQ1P31415 396 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 BFSP1Q12934 665 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 MKNK1Q9BUB5 465 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 RSAD1Q9HA92 442 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 C1orf112Q9NSG2 853 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 KIAA0355O15063 1070 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 SLC16A3O15427 465 aaKnown RBP11.85□□□□□ -0.51
PROM1-207ENST00000508167 AMHP03971 560 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 ATP1A1P05023 1023 aaKnown RBP11.85□□□□□ -0.51
PROM1-207ENST00000508167 MLH1P40692 756 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 MXI1P50539 228 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 MYBPC2Q14324 1141 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 CNKSR3Q6P9H4 555 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 FRMD5Q7Z6J6 570 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 MSANTD4Q8NCY6 345 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 PNKPQ96T60 521 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 CAPN6Q9Y6Q1 641 aa11.85□□□□□ -0.51
PROM1-207ENST00000508167 POMCP01189 267 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 AFPP02771 609 aaKnown RBP11.84□□□□□ -0.51
PROM1-207ENST00000508167 RFC2P35250 354 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 TMEM192Q8IY95 271 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 RAB21Q9UL25 225 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 URI1O94763 535 aaPredicted RBP11.84□□□□□ -0.51
PROM1-207ENST00000508167 ADRB2P07550 413 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 CYP24A1Q07973 514 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 KCNH2Q12809 1159 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 TMEM132DQ14C87 1099 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 DUOXA2Q1HG44 320 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 IRF2BP2Q7Z5L9 587 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 NUB1Q9Y5A7 615 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 LACTBL1A8MY62 500 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 PDE2AO00408 941 aaPredicted RBP11.84□□□□□ -0.51
PROM1-207ENST00000508167 IL18RAPO95256 599 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 GRM5P41594 1212 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 PIK3CAP42336 1068 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 MYL7Q01449 175 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 CYP27A1Q02318 531 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 PLEKHG4Q58EX7 1191 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 WDR44Q5JSH3 913 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 C1orf220Q5T0J3 134 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 ZNF365Q70YC5 407 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 SLC9A9Q8IVB4 645 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 BEST2Q8NFU1 509 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 SLC35C1Q96A29 364 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 ZFP42Q96MM3 310 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 YME1L1Q96TA2 773 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 CDC23Q9UJX2 597 aa11.84□□□□□ -0.51
PROM1-207ENST00000508167 A0A0U1RQF3 1178 aa11.83□□□□□ -0.51
PROM1-207ENST00000508167 ZNF569Q5MCW4 686 aa11.83□□□□□ -0.51
PROM1-207ENST00000508167 BRSK2Q8IWQ3 736 aa11.83□□□□□ -0.51
PROM1-207ENST00000508167 C12orf56Q8IXR9 622 aa11.83□□□□□ -0.51
PROM1-207ENST00000508167 HELQQ8TDG4 1101 aa11.83□□□□□ -0.51
PROM1-207ENST00000508167 SYN2Q92777 582 aaPredicted RBP11.83□□□□□ -0.51
PROM1-207ENST00000508167 EDEM3Q9BZQ6 932 aa11.83□□□□□ -0.51
PROM1-207ENST00000508167 IL23AQ9NPF7 189 aa11.83□□□□□ -0.51
PROM1-207ENST00000508167 TBKBP1A7MCY6 615 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 ENPP3O14638 875 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 MGEA5O60502 916 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms