RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 ERVMER34-1Q9H9K5 563 aa7.73□□□□□ -1.17
CDH9-202ENST00000505020 SEMA3GQ9NS98 782 aa7.73□□□□□ -1.17
CDH9-202ENST00000505020 PPP1R14DQ9NXH3 145 aa7.73□□□□□ -1.17
CDH9-202ENST00000505020 FEM1BQ9UK73 627 aa7.73□□□□□ -1.17
CDH9-202ENST00000505020 CPSF3Q9UKF6 684 aaKnown RBP7.73□□□□□ -1.17
CDH9-202ENST00000505020 CYP8B1Q9UNU6 501 aa7.73□□□□□ -1.17
CDH9-202ENST00000505020 LRRIQ4A6NIV6 560 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 SLC22A31A6NKX4 558 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 GTPBP1O00178 669 aaKnown RBP7.72□□□□□ -1.17
CDH9-202ENST00000505020 LARGE1O95461 756 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 LRG1P02750 347 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 TP53P04637 393 aaPredicted RBP7.72□□□□□ -1.17
CDH9-202ENST00000505020 EPHX1P07099 455 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 ASGR1P07306 291 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 SLFN14P0C7P3 912 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 ITPKAP23677 461 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 S100A5P33763 92 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 ZNF143P52747 638 aaPredicted RBP7.72□□□□□ -1.17
CDH9-202ENST00000505020 RAD23AP54725 363 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 VAMP2P63027 116 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 ITIH3Q06033 890 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 RUNX1T1Q06455 604 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 NR5A1Q13285 461 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 PGS1Q32NB8 556 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 MTFR2Q6P444 385 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 MAEAQ7L5Y9 396 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 SRBD1Q8N5C6 995 aaKnown RBP7.72□□□□□ -1.17
CDH9-202ENST00000505020 C10orf53Q8N6V4 93 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 GBP7Q8N8V2 638 aaPredicted RBP7.72□□□□□ -1.17
CDH9-202ENST00000505020 LMBR1Q8WVP7 490 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 MUL1Q969V5 352 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 LRRC45Q96CN5 670 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 APIPQ96GX9 242 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 TUBA1CQ9BQE3 449 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 STK33Q9BYT3 514 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 FHDC1Q9C0D6 1143 aaPredicted RBP7.72□□□□□ -1.17
CDH9-202ENST00000505020 USP40Q9NVE5 1235 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 CACNG4Q9UBN1 327 aa7.72□□□□□ -1.17
CDH9-202ENST00000505020 SRP68Q9UHB9 627 aaKnown RBP7.72□□□□□ -1.17
CDH9-202ENST00000505020 AGAP14A8MT82 685 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 TAF4O00268 1085 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 PSMA7O14818 248 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 CAMTA2O94983 1202 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 PRLRP16471 622 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 AKT1P31749 480 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 NR2C2P49116 596 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 SH3BP2P78314 561 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 GABPB1Q06547 395 aaPredicted RBP7.71□□□□□ -1.17
CDH9-202ENST00000505020 STK4Q13043 487 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 SNX1Q13596 522 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 FRG1Q14331 258 aaKnown RBP7.71□□□□□ -1.17
CDH9-202ENST00000505020 LBRQ14739 615 aaKnown RBP7.71□□□□□ -1.17
CDH9-202ENST00000505020 CCDC40Q4G0X9 1142 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 USP39Q53GS9 565 aaKnown RBP7.71□□□□□ -1.17
CDH9-202ENST00000505020 IER5Q5VY09 327 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 TTC19Q6DKK2 380 aaPredicted RBP7.71□□□□□ -1.17
CDH9-202ENST00000505020 WDR93Q6P2C0 686 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 SZRD1Q7Z422 152 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 IGSF22Q8N9C0 903 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 KCNG4Q8TDN1 519 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 STK35Q8TDR2 534 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 ACMSDQ8TDX5 336 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 TEKT4Q8WW24 435 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 FGD4Q96M96 766 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 OSMRQ99650 979 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 GCOM2Q9BZD3 368 aaPredicted RBP7.71□□□□□ -1.17
CDH9-202ENST00000505020 CD244Q9BZW8 370 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 NDST4Q9H3R1 872 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 TMEM39AQ9NV64 488 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 GMIPQ9P107 970 aa7.71□□□□□ -1.17
CDH9-202ENST00000505020 SUCLA2Q9P2R7 463 aaPredicted RBP7.71□□□□□ -1.17
CDH9-202ENST00000505020 ZNF215Q9UL58 517 aaPredicted RBP7.71□□□□□ -1.17
CDH9-202ENST00000505020 ASXL2Q76L83 1435 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 ARHGAP6O43182 974 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 SCGB1D1O95968 90 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 JUPP14923 745 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 CDH3P22223 829 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 SFPQP23246 707 aaKnown RBP eCLIP7.71□□□□□ -1.18
CDH9-202ENST00000505020 KRT2P35908 639 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 ZNF41P51814 821 aaPredicted RBP7.71□□□□□ -1.18
CDH9-202ENST00000505020 NUCB2P80303 420 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 UBE3AQ05086 875 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 CETN1Q12798 172 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 SF1Q15637 639 aaKnown RBP7.71□□□□□ -1.18
CDH9-202ENST00000505020 HIF1AQ16665 826 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 FCRLBQ6BAA4 426 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 ZYG11AQ6WRX3 759 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 DHX32Q7L7V1 743 aaKnown RBP7.71□□□□□ -1.18
CDH9-202ENST00000505020 TTC7BQ86TV6 843 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 RIOX2Q8IUF8 465 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 STT3BQ8TCJ2 826 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 DCAF11Q8TEB1 546 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 DEPDC1BQ8WUY9 529 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 NOL10Q9BSC4 688 aaKnown RBP7.71□□□□□ -1.18
CDH9-202ENST00000505020 REXO4Q9GZR2 422 aaKnown RBP7.71□□□□□ -1.18
CDH9-202ENST00000505020 PRDM13Q9H4Q3 707 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 SYNCQ9H7C4 482 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 CBX8Q9HC52 389 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 MID1IP1Q9NPA3 183 aa7.71□□□□□ -1.18
CDH9-202ENST00000505020 C5AR2Q9P296 337 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms