RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 CFHP08603 1231 aa24.05■■□□□ 1.44
LSM6-203ENST00000503982 RPL9P32969 192 aaKnown RBP24.05■■□□□ 1.44
LSM6-203ENST00000503982 TXLNAP40222 546 aa24.05■■□□□ 1.44
LSM6-203ENST00000503982 NTHL1P78549 312 aa24.05■■□□□ 1.44
LSM6-203ENST00000503982 SPAG1Q07617 926 aa24.05■■□□□ 1.44
LSM6-203ENST00000503982 RAB33AQ14088 237 aa24.05■■□□□ 1.44
LSM6-203ENST00000503982 SPECC1Q5M775 1068 aa24.05■■□□□ 1.44
LSM6-203ENST00000503982 CD300LGQ6UXG3 332 aa24.05■■□□□ 1.44
LSM6-203ENST00000503982 LARP4BQ92615 738 aaKnown RBP24.05■■□□□ 1.44
LSM6-203ENST00000503982 FAM212AQ96EL1 285 aa24.05■■□□□ 1.44
LSM6-203ENST00000503982 KIF12Q96FN5 646 aa24.05■■□□□ 1.44
LSM6-203ENST00000503982 BLOC1S4Q9NUP1 217 aa24.05■■□□□ 1.44
LSM6-203ENST00000503982 EPS15L1Q9UBC2 864 aa24.05■■□□□ 1.44
LSM6-203ENST00000503982 WDFY4Q6ZS81 3184 aa24.04■■□□□ 1.44
LSM6-203ENST00000503982 NARSO43776 548 aaKnown RBP24.04■■□□□ 1.44
LSM6-203ENST00000503982 TRAK2O60296 914 aa24.04■■□□□ 1.44
LSM6-203ENST00000503982 PPP2R3AQ06190 1150 aa24.04■■□□□ 1.44
LSM6-203ENST00000503982 MCL1Q07820 350 aa24.04■■□□□ 1.44
LSM6-203ENST00000503982 SLC10A6Q3KNW5 377 aa24.04■■□□□ 1.44
LSM6-203ENST00000503982 VARS2Q5ST30 1063 aaKnown RBP24.04■■□□□ 1.44
LSM6-203ENST00000503982 ST13P5Q8NFI4 369 aaPredicted RBP24.04■■□□□ 1.44
LSM6-203ENST00000503982 TBX20Q9UMR3 447 aa24.04■■□□□ 1.44
LSM6-203ENST00000503982 BACE2Q9Y5Z0 518 aa24.04■■□□□ 1.44
LSM6-203ENST00000503982 H7C4K7 107 aa24.03■■□□□ 1.44
LSM6-203ENST00000503982 TULP1O00294 542 aaPredicted RBP24.03■■□□□ 1.44
LSM6-203ENST00000503982 CLTAP09496 248 aa24.03■■□□□ 1.44
LSM6-203ENST00000503982 SYT1P21579 422 aa24.03■■□□□ 1.44
LSM6-203ENST00000503982 MRE11P49959 708 aa24.03■■□□□ 1.44
LSM6-203ENST00000503982 ASTLQ6HA08 431 aaPredicted RBP24.03■■□□□ 1.44
LSM6-203ENST00000503982 RSPO2Q6UXX9 243 aaPredicted RBP24.03■■□□□ 1.44
LSM6-203ENST00000503982 SIX5Q8N196 739 aa24.03■■□□□ 1.44
LSM6-203ENST00000503982 KRI1Q8N9T8 703 aaKnown RBP24.03■■□□□ 1.44
LSM6-203ENST00000503982 RPF1Q9H9Y2 349 aaKnown RBP24.03■■□□□ 1.44
LSM6-203ENST00000503982 TUBGCP4Q9UGJ1 667 aa24.03■■□□□ 1.44
LSM6-203ENST00000503982 PRRG1O14668 218 aa24.02■■□□□ 1.44
LSM6-203ENST00000503982 XPOTO43592 962 aaKnown RBP24.02■■□□□ 1.44
LSM6-203ENST00000503982 LRG1P02750 347 aa24.02■■□□□ 1.44
LSM6-203ENST00000503982 LAMP2P13473 410 aa24.02■■□□□ 1.44
LSM6-203ENST00000503982 HOXA9P31269 272 aa24.02■■□□□ 1.44
LSM6-203ENST00000503982 TNFSF9P41273 254 aa24.02■■□□□ 1.44
LSM6-203ENST00000503982 KYAT1Q16773 422 aa24.02■■□□□ 1.44
LSM6-203ENST00000503982 UVSSAQ2YD98 709 aa24.02■■□□□ 1.44
LSM6-203ENST00000503982 FAM173BQ6P4H8 233 aa24.02■■□□□ 1.44
LSM6-203ENST00000503982 HSCBQ8IWL3 235 aa24.02■■□□□ 1.44
LSM6-203ENST00000503982 LRRC15Q8TF66 581 aa24.02■■□□□ 1.44
LSM6-203ENST00000503982 ATOH1Q92858 354 aaPredicted RBP24.02■■□□□ 1.44
LSM6-203ENST00000503982 NXPE3Q969Y0 559 aa24.02■■□□□ 1.44
LSM6-203ENST00000503982 EPSTI1Q96J88 318 aa24.02■■□□□ 1.44
LSM6-203ENST00000503982 MSTO1Q9BUK6 570 aa24.02■■□□□ 1.44
LSM6-203ENST00000503982 CCSER1Q9C0I3 900 aa24.02■■□□□ 1.44
LSM6-203ENST00000503982 SYN3O14994 580 aa24.01■■□□□ 1.43
LSM6-203ENST00000503982 NMT1P30419 496 aaKnown RBP24.01■■□□□ 1.43
LSM6-203ENST00000503982 ROR1Q01973 937 aa24.01■■□□□ 1.43
LSM6-203ENST00000503982 TCF15Q12870 199 aa24.01■■□□□ 1.43
LSM6-203ENST00000503982 CTXN3Q4LDR2 81 aa24.01■■□□□ 1.43
LSM6-203ENST00000503982 DYMQ7RTS9 669 aa24.01■■□□□ 1.43
LSM6-203ENST00000503982 TMEM105Q8N8V8 129 aa24.01■■□□□ 1.43
LSM6-203ENST00000503982 IRF2BPLQ9H1B7 796 aa24.01■■□□□ 1.43
LSM6-203ENST00000503982 PLEKHA5Q9HAU0 1116 aa24.01■■□□□ 1.43
LSM6-203ENST00000503982 FAM86C1Q9NVL1 165 aa24.01■■□□□ 1.43
LSM6-203ENST00000503982 CA14Q9ULX7 337 aa24.01■■□□□ 1.43
LSM6-203ENST00000503982 MYH15Q9Y2K3 1946 aa24■■□□□ 1.43
LSM6-203ENST00000503982 OGTO15294 1046 aa24■■□□□ 1.43
LSM6-203ENST00000503982 SCP2P22307 547 aa24■■□□□ 1.43
LSM6-203ENST00000503982 DDIT3P35638 169 aa24■■□□□ 1.43
LSM6-203ENST00000503982 RESTQ13127 1097 aa24■■□□□ 1.43
LSM6-203ENST00000503982 PABPC1LQ4VXU2 614 aaKnown RBP24■■□□□ 1.43
LSM6-203ENST00000503982 RRAGBQ5VZM2 374 aa24■■□□□ 1.43
LSM6-203ENST00000503982 ZNF280DQ6N043 979 aa24■■□□□ 1.43
LSM6-203ENST00000503982 SLC44A3Q8N4M1 653 aa24■■□□□ 1.43
LSM6-203ENST00000503982 APPL2Q8NEU8 664 aa24■■□□□ 1.43
LSM6-203ENST00000503982 CLIC6Q96NY7 704 aa24■■□□□ 1.43
LSM6-203ENST00000503982 HAPLN2Q9GZV7 340 aa24■■□□□ 1.43
LSM6-203ENST00000503982 CYP4F11Q9HBI6 524 aa24■■□□□ 1.43
LSM6-203ENST00000503982 HCFC1R1Q9NWW0 138 aa24■■□□□ 1.43
LSM6-203ENST00000503982 CDH7Q9ULB5 785 aa24■■□□□ 1.43
LSM6-203ENST00000503982 UBQLN1Q9UMX0 589 aaKnown RBP24■■□□□ 1.43
LSM6-203ENST00000503982 ZFP37Q9Y6Q3 630 aaPredicted RBP24■■□□□ 1.43
LSM6-203ENST00000503982 NUMBLQ9Y6R0 609 aa24■■□□□ 1.43
LSM6-203ENST00000503982 LACTBL1A8MY62 500 aa23.99■■□□□ 1.43
LSM6-203ENST00000503982 H0Y858 1186 aa23.99■■□□□ 1.43
LSM6-203ENST00000503982 MEFVO15553 781 aaPredicted RBP23.99■■□□□ 1.43
LSM6-203ENST00000503982 PAPLNO95428 1278 aa23.99■■□□□ 1.43
LSM6-203ENST00000503982 ABCD1P33897 745 aa23.99■■□□□ 1.43
LSM6-203ENST00000503982 ZNF131P52739 623 aa23.99■■□□□ 1.43
LSM6-203ENST00000503982 DSTYKQ6XUX3 929 aa23.99■■□□□ 1.43
LSM6-203ENST00000503982 USP49Q70CQ1 688 aa23.99■■□□□ 1.43
LSM6-203ENST00000503982 DDX12PQ92771 950 aa23.99■■□□□ 1.43
LSM6-203ENST00000503982 SUSD3Q96L08 255 aa23.99■■□□□ 1.43
LSM6-203ENST00000503982 PHOX2BQ99453 314 aa23.99■■□□□ 1.43
LSM6-203ENST00000503982 SRPRBQ9Y5M8 271 aaKnown RBP23.99■■□□□ 1.43
LSM6-203ENST00000503982 WDR27A2RRH5 827 aa23.98■■□□□ 1.43
LSM6-203ENST00000503982 GALR2O43603 387 aaPredicted RBP23.98■■□□□ 1.43
LSM6-203ENST00000503982 SRFP11831 508 aa23.98■■□□□ 1.43
LSM6-203ENST00000503982 CPB1P15086 417 aa23.98■■□□□ 1.43
LSM6-203ENST00000503982 NUBP1P53384 320 aa23.98■■□□□ 1.43
LSM6-203ENST00000503982 PTPAQ15257 358 aa23.98■■□□□ 1.43
LSM6-203ENST00000503982 ZNF461Q8TAF7 563 aa23.98■■□□□ 1.43
LSM6-203ENST00000503982 ITFG1Q8TB96 612 aa23.98■■□□□ 1.43
LSM6-203ENST00000503982 ING5Q8WYH8 240 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms