RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 ARVCFO00192 962 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 TULP1O00294 542 aaPredicted RBP7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 EVI5O60447 810 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 ZC3H11AO75152 810 aaKnown RBP eCLIP7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 RECQL4O94761 1208 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 GFPT2O94808 682 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 IL18RAPO95256 599 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 ASS1P00966 412 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 CALCAP01258 141 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 CD4P01730 458 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 SERPING1P05155 500 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 GHRP10912 638 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 CKBP12277 381 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 RFX1P22670 979 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 CD52P31358 61 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 CLCN1P35523 988 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 PIK3CAP42336 1068 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 KIF11P52732 1056 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 MYL6P60660 151 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 NOP14P78316 857 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 TFAMQ00059 246 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 CYP27A1Q02318 531 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 ARID5AQ03989 594 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 PTK2Q05397 1052 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 GFPT1Q06210 699 aaPredicted RBP7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 BIRC3Q13489 604 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 NCOA4Q13772 614 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 HSP90AA2PQ14568 343 aaPredicted RBP7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 GPNMBQ14956 572 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 ZBTB6Q15916 424 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 ARHGAP44Q17R89 818 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 XKR4Q5GH76 650 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 CTU1Q7Z7A3 348 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 USP37Q86T82 979 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 FAM71AQ8IYT1 594 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 ZNF710Q8N1W2 664 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 C1orf127Q8N9H9 656 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 LNX1Q8TBB1 728 aaPredicted RBP7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 SLC20A1Q8WUM9 679 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 VTI1AQ96AJ9 217 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 ARMC5Q96C12 935 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 NT5C1BQ96P26 610 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 SPAG5Q96R06 1193 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 EIF3CQ99613 913 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 ADPGKQ9BRR6 497 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 RNF208Q9H0X6 261 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 NUCKS1Q9H1E3 243 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 HAUS4Q9H6D7 363 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 UBE2TQ9NPD8 197 aaPredicted RBP7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 ACP6Q9NPH0 428 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 RNF19AQ9NV58 838 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 TRIM10Q9UDY6 481 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 DAAM1Q9Y4D1 1078 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 IPPQ9Y573 584 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 MYH10P35580 1976 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 MICAL3Q7RTP6 2002 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 LTBP2Q14767 1821 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 A0A087X0T9 212 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 M0QZ92 97 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 DDX3XO00571 662 aaKnown RBP eCLIP7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 PPEF2O14830 753 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 CAND2O75155 1236 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 RPS6KA5O75582 802 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 RPLP2P05387 115 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 FAM228BP0C875 321 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 COL6A1P12109 1028 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 ATF7P17544 494 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 CHRNB2P17787 502 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 AKAP5P24588 427 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 STAT1P42224 750 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 ASPAP45381 313 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 AFF1P51825 1210 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 LBX1P52954 281 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 AP3M2P53677 418 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 GCNT1Q02742 428 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 SOX4Q06945 474 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 KLHL30Q0D2K2 578 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 CETN1Q12798 172 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 SURF1Q15526 300 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 KYAT1Q16773 422 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 DUOXA2Q1HG44 320 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 TCTN1Q2MV58 587 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 GLRA4Q5JXX5 417 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 FBXO46Q6PJ61 603 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 NOP9Q86U38 636 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 RSPH3Q86UC2 560 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 DNAAF5Q86Y56 855 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 PALB2Q86YC2 1186 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 CCDC170Q8IYT3 715 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 PPM1KQ8N3J5 372 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 GSTCDQ8NEC7 633 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 SLC30A5Q8TAD4 765 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 EPS8L1Q8TE68 723 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 DIS3LQ8TF46 1054 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 LINC01599Q8WXQ3 324 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 C18orf25Q96B23 403 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 C16orf45Q96MC5 204 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 ACAP3Q96P50 834 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 LACRTQ9GZZ8 138 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 SDCBP2Q9H190 292 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms