RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 CPB2Q96IY4 423 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 OSBPL9Q96SU4 736 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 ARHGAP39Q9C0H5 1083 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 TAS2R14Q9NYV8 317 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 MYH10P35580 1976 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 A0A1B0GUA9 196 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 GPR32O75388 356 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 IRX5P78411 483 aaPredicted RBP23.62■■□□□ 1.37
PTPN13-205ENST00000502971 TFAMQ00059 246 aaKnown RBP23.62■■□□□ 1.37
PTPN13-205ENST00000502971 BEX3Q00994 111 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 TAF3Q5VWG9 929 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 SYCE1Q8N0S2 351 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 TRPV1Q8NER1 839 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 DDX1Q92499 740 aaKnown RBP23.62■■□□□ 1.37
PTPN13-205ENST00000502971 PCDHB18PQ96TA0 734 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 ARID3AQ99856 593 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 ADPGKQ9BRR6 497 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 FAM49AQ9H0Q0 323 aaPredicted RBP23.62■■□□□ 1.37
PTPN13-205ENST00000502971 NUB1Q9Y5A7 615 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 PCDHB2Q9Y5E7 798 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 CASP8AP2Q9UKL3 1982 aa23.61■■□□□ 1.37
PTPN13-205ENST00000502971 FKTNO75072 461 aa23.61■■□□□ 1.37
PTPN13-205ENST00000502971 CST3P01034 146 aaPredicted RBP23.61■■□□□ 1.37
PTPN13-205ENST00000502971 TFRCP02786 760 aaKnown RBP23.61■■□□□ 1.37
PTPN13-205ENST00000502971 FTLP02792 175 aaPredicted RBP23.61■■□□□ 1.37
PTPN13-205ENST00000502971 MMEP08473 750 aa23.61■■□□□ 1.37
PTPN13-205ENST00000502971 CXCL8P10145 99 aa23.61■■□□□ 1.37
PTPN13-205ENST00000502971 CYBAP13498 195 aa23.61■■□□□ 1.37
PTPN13-205ENST00000502971 ACO1P21399 889 aaKnown RBP23.61■■□□□ 1.37
PTPN13-205ENST00000502971 TRPC3Q13507 836 aa23.61■■□□□ 1.37
PTPN13-205ENST00000502971 TCEAL1Q15170 157 aa23.61■■□□□ 1.37
PTPN13-205ENST00000502971 KIZQ2M2Z5 673 aa23.61■■□□□ 1.37
PTPN13-205ENST00000502971 APBB1IPQ7Z5R6 666 aaPredicted RBP23.61■■□□□ 1.37
PTPN13-205ENST00000502971 MTERF4Q7Z6M4 381 aaKnown RBP23.61■■□□□ 1.37
PTPN13-205ENST00000502971 EFCAB13Q8IY85 973 aa23.61■■□□□ 1.37
PTPN13-205ENST00000502971 LRRC57Q8N9N7 239 aa23.61■■□□□ 1.37
PTPN13-205ENST00000502971 CNTN6Q9UQ52 1028 aa23.61■■□□□ 1.37
PTPN13-205ENST00000502971 GNAT1P11488 350 aa23.6■■□□□ 1.37
PTPN13-205ENST00000502971 PURAQ00577 322 aaKnown RBP23.6■■□□□ 1.37
PTPN13-205ENST00000502971 SLFN11Q7Z7L1 901 aa23.6■■□□□ 1.37
PTPN13-205ENST00000502971 RHOT2Q8IXI1 618 aa23.6■■□□□ 1.37
PTPN13-205ENST00000502971 SLC35G2Q8TBE7 412 aa23.6■■□□□ 1.37
PTPN13-205ENST00000502971 THAP2Q9H0W7 228 aa23.6■■□□□ 1.37
PTPN13-205ENST00000502971 ASB7Q9H672 318 aa23.6■■□□□ 1.37
PTPN13-205ENST00000502971 GABRQQ9UN88 632 aa23.6■■□□□ 1.37
PTPN13-205ENST00000502971 NCK2O43639 380 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 FTCDO95954 541 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 ABCB4P21439 1286 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 FLT3LGP49771 235 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 GJA9P57773 515 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 DCAF4L1Q3SXM0 396 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 CREG2Q8IUH2 290 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 TMEM192Q8IY95 271 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 CAGE1Q8TC20 777 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 TRIB2Q92519 343 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 CAPZA3Q96KX2 299 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 ACP6Q9NPH0 428 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 RNF14Q9UBS8 474 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 PCDHB4Q9Y5E5 795 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 C17orf102A2RUQ5 167 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 ZNF185O15231 689 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 HADHBP55084 474 aaKnown RBP23.59■■□□□ 1.37
PTPN13-205ENST00000502971 MYL6P60660 151 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 GPC5P78333 572 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 RUFY4Q6ZNE9 571 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 TAF4BQ92750 862 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 MMS19Q96T76 1030 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 WBP1LQ9NX94 342 aa23.59■■□□□ 1.37
PTPN13-205ENST00000502971 LACTBL1A8MY62 500 aa23.58■■□□□ 1.37
PTPN13-205ENST00000502971 CLSTN1O94985 981 aa23.58■■□□□ 1.37
PTPN13-205ENST00000502971 HOXC8P31273 242 aa23.58■■□□□ 1.37
PTPN13-205ENST00000502971 HIC1Q14526 733 aa23.58■■□□□ 1.37
PTPN13-205ENST00000502971 ZNF572Q7Z3I7 529 aaPredicted RBP23.58■■□□□ 1.37
PTPN13-205ENST00000502971 NME8Q8N427 588 aa23.58■■□□□ 1.37
PTPN13-205ENST00000502971 CD99L2Q8TCZ2 262 aa23.58■■□□□ 1.37
PTPN13-205ENST00000502971 NIF3L1Q9GZT8 377 aa23.58■■□□□ 1.37
PTPN13-205ENST00000502971 SRRDQ9UH36 339 aa23.58■■□□□ 1.37
PTPN13-205ENST00000502971 ANK1P16157 1881 aa23.57■■□□□ 1.36
PTPN13-205ENST00000502971 C6orf222P0C671 652 aaPredicted RBP23.57■■□□□ 1.36
PTPN13-205ENST00000502971 DARSP14868 501 aaKnown RBP23.57■■□□□ 1.36
PTPN13-205ENST00000502971 PRMT2P55345 433 aa23.57■■□□□ 1.36
PTPN13-205ENST00000502971 PRKCZQ05513 592 aa23.57■■□□□ 1.36
PTPN13-205ENST00000502971 CD302Q8IX05 232 aa23.57■■□□□ 1.36
PTPN13-205ENST00000502971 PDCL2Q8N4E4 241 aa23.57■■□□□ 1.36
PTPN13-205ENST00000502971 UBR7Q8N806 425 aa23.57■■□□□ 1.36
PTPN13-205ENST00000502971 COG1Q8WTW3 980 aa23.57■■□□□ 1.36
PTPN13-205ENST00000502971 ZNF296Q8WUU4 475 aaPredicted RBP23.57■■□□□ 1.36
PTPN13-205ENST00000502971 ARHGEF26Q96DR7 871 aa23.57■■□□□ 1.36
PTPN13-205ENST00000502971 FAXDC2Q96IV6 333 aa23.57■■□□□ 1.36
PTPN13-205ENST00000502971 ACAP3Q96P50 834 aa23.57■■□□□ 1.36
PTPN13-205ENST00000502971 UPF3AQ9H1J1 476 aaKnown RBP23.57■■□□□ 1.36
PTPN13-205ENST00000502971 UMODL1Q5DID0 1318 aa23.57■■□□□ 1.36
PTPN13-205ENST00000502971 CES2O00748 559 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 TREHO43280 583 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 GRM5P41594 1212 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 NKX3-2P78367 333 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 ITIH3Q06033 890 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 TMEM62Q0P6H9 643 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 RPS6KA1Q15418 735 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 CLEC16AQ2KHT3 1053 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms