RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 SIP14410 1827 aa9.08□□□□□ -0.96
SF3A1-210ENST00000498259 A0A1W2PQ45 241 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-210ENST00000498259 A0A1W2PQY0 241 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 CTAGE9A4FU28 777 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 BTNL10A8MVZ5 291 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 LACTBL1A8MY62 500 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 FOXN3O00409 490 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-210ENST00000498259 MED7O43513 233 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 KIF4AO95239 1232 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 NPTXRO95502 500 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 STAU1O95793 577 aaKnown RBP9.07□□□□□ -0.96
SF3A1-210ENST00000498259 ASS1P00966 412 aaKnown RBP9.07□□□□□ -0.96
SF3A1-210ENST00000498259 KRT19P08727 400 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 CXCL8P10145 99 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 GZMAP12544 262 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 HOXA11P31270 313 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-210ENST00000498259 NFX1Q12986 1120 aaKnown RBP9.07□□□□□ -0.96
SF3A1-210ENST00000498259 PAK2Q13177 524 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 MTF1Q14872 753 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 ASTE1Q2TB18 679 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-210ENST00000498259 FAM26DQ5JW98 314 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 EEF1DP3Q658K8 133 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 HGSNATQ68CP4 663 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 LHX8Q68G74 356 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 DPY19L2P1Q6NXN4 242 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 ALKBH5Q6P6C2 394 aaKnown RBP9.07□□□□□ -0.96
SF3A1-210ENST00000498259 ZSWIM2Q8NEG5 633 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 HELQQ8TDG4 1101 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 CTNNBL1Q8WYA6 563 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-210ENST00000498259 RSPH1Q8WYR4 309 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 ZNF516Q92618 1163 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 KIF12Q96FN5 646 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 NOX5Q96PH1 765 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 AGPAT1Q99943 283 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 TRAIPQ9BWF2 469 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 FTHL17Q9BXU8 183 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 MTMR12Q9C0I1 747 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 SENP6Q9GZR1 1112 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-210ENST00000498259 NIF3L1Q9GZT8 377 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 VRTNQ9H8Y1 702 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 SEPT11Q9NVA2 429 aaKnown RBP9.07□□□□□ -0.96
SF3A1-210ENST00000498259 WBP1LQ9NX94 342 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 DPP3Q9NY33 737 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 DNAI1Q9UI46 699 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 LCMT1Q9UIC8 334 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 TSKSQ9UJT2 592 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 KIAA1257Q9ULG3 409 aa9.07□□□□□ -0.96
SF3A1-210ENST00000498259 UBQLN1Q9UMX0 589 aaKnown RBP9.07□□□□□ -0.96
SF3A1-210ENST00000498259 A0A0A6YYK5 440 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-210ENST00000498259 ARHGEF37A1IGU5 675 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 TTLL13PA6NNM8 815 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 ARVCFO00192 962 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 PJA2O43164 708 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 LRRN2O75325 713 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 CSDE1O75534 798 aaKnown RBP9.06□□□□□ -0.96
SF3A1-210ENST00000498259 CAPN15O75808 1086 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 EDN1P05305 212 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 H2AFZP0C0S5 128 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 KCNE1P15382 129 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 CYP3A5P20815 502 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 SNX16P57768 344 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 TNNC1P63316 161 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 ZNF200P98182 395 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-210ENST00000498259 CDR2Q01850 454 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 GFPT1Q06210 699 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-210ENST00000498259 SLC10A6Q3KNW5 377 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 SEZ6Q53EL9 994 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 ZBTB41Q5SVQ8 909 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 POTEHQ6S545 545 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 H2AFVQ71UI9 128 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 SYCE1Q8N0S2 351 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 C17orf53Q8N3J3 647 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-210ENST00000498259 LRRC52Q8N7C0 313 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 MSANTD4Q8NCY6 345 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 ACRBPQ8NEB7 543 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 SEMA4DQ92854 862 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 ZNF560Q96MR9 790 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 RPS6KC1Q96S38 1066 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 RNF208Q9H0X6 261 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 PAK6Q9NQU5 681 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-210ENST00000498259 CNTN3Q9P232 1028 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 PARP2Q9UGN5 583 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 NAGPAQ9UK23 515 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 GUCA1BQ9UMX6 200 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 ST3GAL5Q9UNP4 418 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 PCDHB4Q9Y5E5 795 aa9.06□□□□□ -0.96
SF3A1-210ENST00000498259 A0A087X0T9 212 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 ANO9A1A5B4 782 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 USP27XA6NNY8 438 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 RTN2O75298 545 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 PLEKP08567 350 aaPredicted RBP9.05□□□□□ -0.96
SF3A1-210ENST00000498259 FAM163BP0C2L3 166 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 FAM228BP0C875 321 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 MYBL1P10243 752 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 ITGA4P13612 1032 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 CYP11B1P15538 503 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 C1QTNF8P60827 252 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 IRX5P78411 483 aaPredicted RBP9.05□□□□□ -0.96
SF3A1-210ENST00000498259 HTRA3P83110 453 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 CYP27A1Q02318 531 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms