RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 MCM8Q9UJA3 840 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 ODF2LQ9ULJ1 636 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 SIK3Q9Y2K2 1263 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 PCDHGA11Q9Y5H2 935 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 MAFBQ9Y5Q3 323 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 IKBKGQ9Y6K9 419 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 ZMYM2Q9UBW7 1377 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 LRRC53A6NM62 1247 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 WDR64B1ANS9 1081 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 TMEM229AB2RXF0 380 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 K7ENM7 598 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 MYCP01106 439 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 MSL3P1P0C860 447 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 ATP4AP20648 1035 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 SOX11P35716 441 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 MATR3P43243 847 aaKnown RBP eCLIP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 KIF11P52732 1056 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 POLR2FP61218 127 aaKnown RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 DLG4P78352 724 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 GHRHRQ02643 423 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 DMPKQ09013 629 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 POU4F2Q12837 409 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 EIF2B5Q13144 721 aaKnown RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 GRM1Q13255 1194 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 DRP2Q13474 957 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 MAN2A1Q16706 1144 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 MTERF2Q49AM1 385 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 GPAT2Q6NUI2 795 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 DPH6Q7L8W6 267 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 RELL1Q8IUW5 271 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 CNGA4Q8IV77 575 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 SYCP3Q8IZU3 236 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 TMCO5AQ8N6Q1 288 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 TMEM143Q96AN5 459 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 CEP63Q96MT8 703 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 PANX2Q96RD6 677 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 JPH2Q9BR39 696 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 LACRTQ9GZZ8 138 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 TBC1D22BQ9NU19 505 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 ZNF215Q9UL58 517 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 MAFFQ9ULX9 164 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 PCDHA10Q9Y5I2 948 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 CASP8AP2Q9UKL3 1982 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 PABPN1LA6NDY0 278 aaKnown RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 ENC1O14682 589 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 ZNF263O14978 683 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 ATP2A1O14983 1001 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 CETN3O15182 167 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 NOL4O94818 638 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 CELF2O95319 508 aaKnown RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 GJB1P08034 283 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 RPSAP08865 295 aaKnown RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 UBA1P22314 1058 aaKnown RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 ALDH5A1P51649 535 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 HDAC4P56524 1084 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 ETF1P62495 437 aaKnown RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 NFX1Q12986 1120 aaKnown RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 CLN3Q13286 438 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 RCN1Q15293 331 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 STXBP2Q15833 593 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 KIAA0753Q2KHM9 967 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 GNPTABQ3T906 1256 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 CCBE1Q6UXH8 406 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 TRIM59Q8IWR1 403 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 CCDC112Q8NEF3 446 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 HDAC7Q8WUI4 952 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 SLC35B4Q969S0 331 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 POP1Q99575 1024 aaKnown RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 CCDC68Q9H2F9 335 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 ARHGAP20Q9P2F6 1191 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 SLC9A2Q9UBY0 812 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 AJAP1Q9UKB5 411 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 CAPN11Q9UMQ6 739 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 GUCA1BQ9UMX6 200 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 SCINQ9Y6U3 715 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 ATAD5Q96QE3 1844 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 PFASO15067 1338 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 FRMPD4Q14CM0 1322 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 ADGRA3Q8IWK6 1321 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 ATP9BO43861 1147 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 TLR2O60603 784 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 CSDE1O75534 798 aaKnown RBP6.62□□□□□ -1.35
SSBP1-213ENST00000496622 SKAP2O75563 359 aaPredicted RBP6.62□□□□□ -1.35
SSBP1-213ENST00000496622 URI1O94763 535 aaPredicted RBP6.62□□□□□ -1.35
SSBP1-213ENST00000496622 HOXA7P31268 230 aaPredicted RBP6.62□□□□□ -1.35
SSBP1-213ENST00000496622 USP8P40818 1118 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 OAZ1P54368 228 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 CHMP4BP1P59074 171 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 PSMC5P62195 406 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 CBWD6Q4V339 395 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 CRTC2Q53ET0 693 aaPredicted RBP6.62□□□□□ -1.35
SSBP1-213ENST00000496622 CBWD3Q5JTY5 395 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 CBWD5Q5RIA9 395 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 TTC39BQ5VTQ0 682 aaPredicted RBP6.62□□□□□ -1.35
SSBP1-213ENST00000496622 NDUFAF2Q8N183 169 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.62□□□□□ -1.35
SSBP1-213ENST00000496622 EXOC4Q96A65 974 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 SAAL1Q96ER3 474 aa6.62□□□□□ -1.35
SSBP1-213ENST00000496622 CCDC114Q96M63 670 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms