RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 GLIS3Q8NEA6 775 aa13.43□□□□□ -0.26
TRIM59-207ENST00000496222 ZSWIM2Q8NEG5 633 aa13.43□□□□□ -0.26
TRIM59-207ENST00000496222 CMASQ8NFW8 434 aaPredicted RBP13.43□□□□□ -0.26
TRIM59-207ENST00000496222 LEO1Q8WVC0 666 aaPredicted RBP13.43□□□□□ -0.26
TRIM59-207ENST00000496222 DHX58Q96C10 678 aa13.43□□□□□ -0.26
TRIM59-207ENST00000496222 MRPL44Q9H9J2 332 aaKnown RBP13.43□□□□□ -0.26
TRIM59-207ENST00000496222 MAN1C1Q9NR34 630 aa13.43□□□□□ -0.26
TRIM59-207ENST00000496222 PANK4Q9NVE7 773 aa13.43□□□□□ -0.26
TRIM59-207ENST00000496222 TUBGCP4Q9UGJ1 667 aa13.43□□□□□ -0.26
TRIM59-207ENST00000496222 POLR2DO15514 142 aaKnown RBP13.42□□□□□ -0.26
TRIM59-207ENST00000496222 TBC1D4O60343 1298 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 GLUD1P00367 558 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 SPATA31D3P0C874 917 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 IDEP14735 1019 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 TKTP29401 623 aaKnown RBP13.42□□□□□ -0.26
TRIM59-207ENST00000496222 LRPAP1P30533 357 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 HOXD13P35453 343 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 MATR3P43243 847 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRIM59-207ENST00000496222 MRPL58Q14197 206 aaKnown RBP13.42□□□□□ -0.26
TRIM59-207ENST00000496222 PSMD5Q16401 504 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 KYAT1Q16773 422 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 SPATA31D4Q6ZUB0 917 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 PALB2Q86YC2 1186 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 RNF135Q8IUD6 432 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 HDAC7Q8WUI4 952 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 HPS3Q969F9 1004 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 ZNF707Q96C28 371 aaPredicted RBP13.42□□□□□ -0.26
TRIM59-207ENST00000496222 NECTIN4Q96NY8 510 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 C7orf25Q9BPX7 421 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 MSTO1Q9BUK6 570 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 RHOBTB2Q9BYZ6 727 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 SFXN1Q9H9B4 322 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 MTRRQ9UBK8 725 aa13.42□□□□□ -0.26
TRIM59-207ENST00000496222 DOCK6Q96HP0 2047 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 RFPL2O75678 378 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 GCNT3O95395 438 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 CYP3A5P20815 502 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 CASP1P29466 404 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 MTHFRP42898 656 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 AARSP49588 968 aaKnown RBP eCLIP13.41□□□□□ -0.26
TRIM59-207ENST00000496222 ACOT2P49753 483 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 GUCY2FP51841 1108 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 WNT7BP56706 349 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 POU5F1Q01860 360 aaKnown RBP13.41□□□□□ -0.26
TRIM59-207ENST00000496222 SLFN12LQ6IEE8 588 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 CES5AQ6NT32 575 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 C15orf39Q6ZRI6 1047 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 EPM2AIP1Q7L775 607 aaPredicted RBP13.41□□□□□ -0.26
TRIM59-207ENST00000496222 CEP57Q86XR8 500 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 GLYCTKQ8IVS8 523 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 KIF12Q96FN5 646 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 RPGRIP1Q96KN7 1286 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 SUSD3Q96L08 255 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 ACCSQ96QU6 501 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 TSPAN18Q96SJ8 248 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 PLEKHA4Q9H4M7 779 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 RPF1Q9H9Y2 349 aaKnown RBP13.41□□□□□ -0.26
TRIM59-207ENST00000496222 AGO2Q9UKV8 859 aaKnown RBP13.41□□□□□ -0.26
TRIM59-207ENST00000496222 HPSEQ9Y251 543 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 PCDHB13Q9Y5F0 798 aa13.41□□□□□ -0.26
TRIM59-207ENST00000496222 MYO10Q9HD67 2058 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 FAM237AA0A1B0GTK4 181 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 PPEF2O14830 753 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 DCXO43602 365 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 ACTN4O43707 911 aaKnown RBP13.4□□□□□ -0.26
TRIM59-207ENST00000496222 GPR37L1O60883 481 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 PRPF6O94906 941 aaKnown RBP13.4□□□□□ -0.26
TRIM59-207ENST00000496222 NFICP08651 508 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 CMA1P23946 247 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 CREMQ03060 361 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 PPP2R3AQ06190 1150 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 ALCAMQ13740 583 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 RAB33AQ14088 237 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 ATAT1Q5SQI0 421 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 SPATA1Q5VX52 437 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 ADALQ6DHV7 355 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 JADE1Q6IE81 842 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 CCDC65Q8IXS2 484 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 KREMEN2Q8NCW0 462 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 RIPOR3Q96MK2 946 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 MAGEF1Q9HAY2 307 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 MUTYHQ9UIF7 546 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 FBXW11Q9UKB1 542 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 KCNH3Q9ULD8 1083 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 UBQLN1Q9UMX0 589 aaKnown RBP13.4□□□□□ -0.26
TRIM59-207ENST00000496222 BACE2Q9Y5Z0 518 aa13.4□□□□□ -0.26
TRIM59-207ENST00000496222 CCDC195A0A1B0GUA6 201 aa13.39□□□□□ -0.27
TRIM59-207ENST00000496222 ANO9A1A5B4 782 aa13.39□□□□□ -0.27
TRIM59-207ENST00000496222 C2CD4DB7Z1M9 353 aa13.39□□□□□ -0.27
TRIM59-207ENST00000496222 M0QZQ0 153 aa13.39□□□□□ -0.27
TRIM59-207ENST00000496222 SYN3O14994 580 aa13.39□□□□□ -0.27
TRIM59-207ENST00000496222 TRAPPC3O43617 180 aa13.39□□□□□ -0.27
TRIM59-207ENST00000496222 N4BP1O75113 896 aaKnown RBP13.39□□□□□ -0.27
TRIM59-207ENST00000496222 OR1D2P34982 312 aa13.39□□□□□ -0.27
TRIM59-207ENST00000496222 KRT85P78386 507 aa13.39□□□□□ -0.27
TRIM59-207ENST00000496222 AMPD3Q01432 767 aa13.39□□□□□ -0.27
TRIM59-207ENST00000496222 POSTNQ15063 836 aa13.39□□□□□ -0.27
TRIM59-207ENST00000496222 VARS2Q5ST30 1063 aaKnown RBP13.39□□□□□ -0.27
TRIM59-207ENST00000496222 SLC8B1Q6J4K2 584 aa13.39□□□□□ -0.27
TRIM59-207ENST00000496222 PDXDC1Q6P996 788 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms