RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 MAGEA13PA6NCF6 341 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 LGALS16A8MUM7 142 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 APBA3O96018 575 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 FGFR4P22455 802 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 GCLMP48507 274 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 DSG1Q02413 1049 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 ATAD3BQ5T9A4 648 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 ENOSF1Q7L5Y1 443 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 CYP4Z1Q86W10 505 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 SFR1Q86XK3 245 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 DENND6AQ8IWF6 608 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 WNK4Q96J92 1243 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 TSEN34Q9BSV6 310 aaKnown RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 BHMT2Q9H2M3 363 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 DHX36Q9H2U1 1008 aaKnown RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 CXorf56Q9H5V9 222 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 SLC30A1Q9Y6M5 507 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 ABCC4O15439 1325 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 ADGRA2Q96PE1 1338 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 IQCA1LA6NCM1 817 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 E7ENQ6 273 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 PGK2P07205 417 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 CPB1P15086 417 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 ACADSP16219 412 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 EPB42P16452 691 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 TCN1P20061 433 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 JAK1P23458 1154 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 KRT20P35900 424 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 IREB2P48200 963 aaKnown RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 PRIM2P49643 509 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 ERFP50548 548 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 AP3B2Q13367 1082 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 CUL4AQ13619 759 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 ARHGEF7Q14155 803 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 KYAT1Q16773 422 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 TRIM65Q6PJ69 517 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 VN1R5Q7Z5H4 357 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 NLRP10Q86W26 655 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 ZNF473Q8WTR7 871 aaKnown RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 FAM213AQ9BRX8 229 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 CARD14Q9BXL6 1004 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 DDX47Q9H0S4 455 aaKnown RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 SH3GLB2Q9NR46 395 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 GALNT8Q9NY28 637 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 MAP3K20Q9NYL2 800 aaKnown RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 NDUFA13Q9P0J0 144 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 GDAQ9Y2T3 454 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 DENND4BO75064 1496 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 STX7O15400 261 aaKnown RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 CAND2O75155 1236 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 GYS1P13807 737 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 MDH1P40925 334 aaKnown RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 SLC1A1P43005 524 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 SULT1E1P49888 294 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 SERPINH1P50454 418 aaKnown RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 PRELPP51888 382 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 AP3M2P53677 418 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 YWHAZP63104 245 aaKnown RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 PUDPQ08623 228 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 PKN2Q16513 984 aaKnown RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 SGSM1Q2NKQ1 1148 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 SNX30Q5VWJ9 437 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 ERAP2Q6P179 960 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 NFRKBQ6P4R8 1299 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 LRIG3Q6UXM1 1119 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 C1orf54Q8WWF1 131 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 QKIQ96PU8 341 aaKnown RBP eCLIP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 OSBPL6Q9BZF3 934 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 PSMC3IPQ9P2W1 217 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 E9PBE3 544 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 KCNN4O15554 427 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 H2AFYO75367 372 aaKnown RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 ALDH1A2O94788 518 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 EIF2AK2P19525 551 aaKnown RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 VHLP40337 213 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 IL12RB1P42701 662 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 MAGEA10P43363 369 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 SESN2P58004 480 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 NFIL3Q16649 462 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 SRLQ86TD4 932 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 DGKHQ86XP1 1220 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 MDM1Q8TC05 714 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 RNFT2Q96EX2 444 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 HIC2Q96JB3 615 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 LSM7Q9UK45 103 aaKnown RBP8.24□□□□□ -1.09
BRCA1-221ENST00000493795 LEMD3Q9Y2U8 911 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 UHRF1BP1LA0JNW5 1464 aa8.24□□□□□ -1.09
BRCA1-221ENST00000493795 ASNA1O43681 348 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 SOX11P35716 441 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 FEN1P39748 380 aaKnown RBP8.23□□□□□ -1.09
BRCA1-221ENST00000493795 TRIM32Q13049 653 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 BYSLQ13895 437 aaKnown RBP8.23□□□□□ -1.09
BRCA1-221ENST00000493795 P3H1Q32P28 736 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 TRIQKQ629K1 86 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 WDR36Q8NI36 951 aaKnown RBP8.23□□□□□ -1.09
BRCA1-221ENST00000493795 XPO6Q96QU8 1125 aaKnown RBP8.23□□□□□ -1.09
BRCA1-221ENST00000493795 ECSITQ9BQ95 431 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 TMCC3Q9ULS5 477 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 KLHL20Q9Y2M5 609 aa8.23□□□□□ -1.09
BRCA1-221ENST00000493795 SPACA6W5XKT8 324 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms