RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 PIEZO1Q92508 2521 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 DENND4AQ7Z401 1863 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 PRRG1O14668 218 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 ZNF197O14709 1029 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 CCL16O15467 120 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 ADAM12O43184 909 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 NARSO43776 548 aaKnown RBP13.59□□□□□ -0.23
COL6A1-205ENST00000492851 LRG1P02750 347 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 KRT18P05783 430 aaKnown RBP13.59□□□□□ -0.23
COL6A1-205ENST00000492851 HARSP12081 509 aaKnown RBP13.59□□□□□ -0.23
COL6A1-205ENST00000492851 ATF2P15336 505 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 PTPN2P17706 415 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 CYP3A5P20815 502 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 BRCC3P46736 316 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 NCKAP1LP55160 1127 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 PFKPQ01813 784 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 SOX4Q06945 474 aaPredicted RBP13.59□□□□□ -0.23
COL6A1-205ENST00000492851 MRPL58Q14197 206 aaKnown RBP13.59□□□□□ -0.23
COL6A1-205ENST00000492851 SLC10A6Q3KNW5 377 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 PABPC1LQ4VXU2 614 aaKnown RBP13.59□□□□□ -0.23
COL6A1-205ENST00000492851 ARSHQ5FYA8 562 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 CWF19L1Q69YN2 538 aaKnown RBP13.59□□□□□ -0.23
COL6A1-205ENST00000492851 CD302Q8IX05 232 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 TCEAL8Q8IYN2 117 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 MYCT1Q8N699 235 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 C3orf58Q8NDZ4 430 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 FGF13Q92913 245 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 ZBTB45Q96K62 511 aaPredicted RBP13.59□□□□□ -0.23
COL6A1-205ENST00000492851 SUSD3Q96L08 255 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 TBC1D32Q96NH3 1257 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 PARVGQ9HBI0 331 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 NUMBLQ9Y6R0 609 aa13.59□□□□□ -0.23
COL6A1-205ENST00000492851 ARHGEF37A1IGU5 675 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 TRAK2O60296 914 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 TBC1D4O60343 1298 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 MICAL2O94851 1124 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 FAM13AO94988 1023 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 MCM4P33991 863 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 DDIT3P35638 169 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 NBL1P41271 181 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 LIG4P49917 911 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 ZNF131P52739 623 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 ROR1Q01973 937 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 PPP2R3AQ06190 1150 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 ZNF280DQ6N043 979 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 GPBP1Q86WP2 473 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 CCDC105Q8IYK2 499 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 ELMOD1Q8N336 334 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 DTWD2Q8NBA8 298 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 CCSER1Q9C0I3 900 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 ARHGEF3Q9NR81 526 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 CCDC39Q9UFE4 941 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 TBX20Q9UMR3 447 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 UBQLN1Q9UMX0 589 aaKnown RBP13.58□□□□□ -0.24
COL6A1-205ENST00000492851 MRPS23Q9Y3D9 190 aaKnown RBP13.58□□□□□ -0.24
COL6A1-205ENST00000492851 SIT1Q9Y3P8 196 aa13.58□□□□□ -0.24
COL6A1-205ENST00000492851 WDFY4Q6ZS81 3184 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 PLXNA3P51805 1871 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 I3L4J1 428 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 HNRNPDLO14979 420 aaKnown RBP13.57□□□□□ -0.24
COL6A1-205ENST00000492851 GFRA3O60609 400 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 TBCAO75347 108 aaKnown RBP13.57□□□□□ -0.24
COL6A1-205ENST00000492851 CD2BP2O95400 341 aaKnown RBP13.57□□□□□ -0.24
COL6A1-205ENST00000492851 PIGRP01833 764 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 LRPAP1P30533 357 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 SF3A1Q15459 793 aaKnown RBP13.57□□□□□ -0.24
COL6A1-205ENST00000492851 CTXN3Q4LDR2 81 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 CYP4A22Q5TCH4 519 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 SLFN12LQ6IEE8 588 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 IQCEQ6IPM2 695 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 PARM1Q6UWI2 310 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 RSPO2Q6UXX9 243 aaPredicted RBP13.57□□□□□ -0.24
COL6A1-205ENST00000492851 KRI1Q8N9T8 703 aaKnown RBP13.57□□□□□ -0.24
COL6A1-205ENST00000492851 LEMD2Q8NC56 503 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 GPR152Q8TDT2 470 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 DDX12PQ92771 950 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 C18orf25Q96B23 403 aaPredicted RBP13.57□□□□□ -0.24
COL6A1-205ENST00000492851 PHOX2BQ99453 314 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 REEP2Q9BRK0 252 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 SEMA4AQ9H3S1 761 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 RPF1Q9H9Y2 349 aaKnown RBP13.57□□□□□ -0.24
COL6A1-205ENST00000492851 CYP4F11Q9HBI6 524 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 DNMT3BQ9UBC3 853 aaKnown RBP13.57□□□□□ -0.24
COL6A1-205ENST00000492851 CA14Q9ULX7 337 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 PCDHB8Q9UN66 801 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 KMT2EQ8IZD2 1858 aa13.57□□□□□ -0.24
COL6A1-205ENST00000492851 NPHP3-ACAD11A0A0J9YXS1 232 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 TTC26A0AVF1 554 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 WDR27A2RRH5 827 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 KRBA1A5PL33 1030 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 OGTO15294 1046 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 PI15O43692 258 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 TXLNAP40222 546 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 ARPP19P56211 112 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 STARD6P59095 220 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 NTHL1P78549 312 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 POU5F1Q01860 360 aaKnown RBP13.56□□□□□ -0.24
COL6A1-205ENST00000492851 PRKCQQ04759 706 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 YWHAHQ04917 246 aaPredicted RBP13.56□□□□□ -0.24
COL6A1-205ENST00000492851 CUL4AQ13619 759 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms