RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 PODXLO00592 558 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 PI15O43692 258 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 NARSO43776 548 aaKnown RBP9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 MICAL2O94851 1124 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 OAZ2O95190 189 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 CLTAP09496 248 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 MYBP10242 640 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 ATF2P15336 505 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 CYP3A5P20815 502 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 FSHRP23945 695 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 GBP2P32456 591 aaPredicted RBP9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 LONP1P36776 959 aaKnown RBP9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 BRCC3P46736 316 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 AARSP49588 968 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 NOLC1Q14978 699 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 TMEM132AQ24JP5 1023 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 PPM1LQ5SGD2 360 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 PHLDB3Q6NSJ2 640 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 POTEHQ6S545 545 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 HAUS6Q7Z4H7 955 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 GRASPQ7Z6J2 395 aaPredicted RBP9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 GLYCTKQ8IVS8 523 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 TCEAL8Q8IYN2 117 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 BEST2Q8NFU1 509 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 FGF13Q92913 245 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 C18orf25Q96B23 403 aaPredicted RBP9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 RTP3Q9BQQ7 232 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 RPP25Q9BUL9 199 aaKnown RBP9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 DDX23Q9BUQ8 820 aaKnown RBP9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 ST6GALNAC4Q9H4F1 302 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 PIDD1Q9HB75 910 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 GOLGA2P5Q9HBQ8 144 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 DLGAP2Q9P1A6 1054 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 LARSQ9P2J5 1176 aaKnown RBP9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 DNMT3BQ9UBC3 853 aaKnown RBP9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 CDY1Q9Y6F8 540 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 EP300Q09472 2414 aaPredicted RBP9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 A0A0B4J269 797 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 NPHP3-ACAD11A0A0J9YXS1 232 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 H0Y858 1186 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 I3L4J1 428 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 CLDN3O15551 220 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 XYLBO75191 536 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 LRPAP1P30533 357 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 OSTNP61366 133 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 NTHL1P78549 312 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 GTF2BQ00403 316 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 POU5F1Q01860 360 aaKnown RBP9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 ROR1Q01973 937 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 GRIN1Q05586 938 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 STRN3Q13033 797 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 PTPAQ15257 358 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 KYAT1Q16773 422 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 VARS2Q5ST30 1063 aaKnown RBP9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 LIN9Q5TKA1 542 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 TPGS2Q68CL5 300 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 PARM1Q6UWI2 310 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 CCDC105Q8IYK2 499 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 SIX5Q8N196 739 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 ITFG1Q8TB96 612 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 SLC7A14Q8TBB6 771 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 FGF14Q92915 247 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 REEP2Q9BRK0 252 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 TCHPQ9BT92 498 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 STRA6Q9BX79 667 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 TBX20Q9UMR3 447 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 SMC3Q9UQE7 1217 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 STYXL1Q9Y6J8 313 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 NUMBLQ9Y6R0 609 aa9.15□□□□□ -0.94
SMARCB1-207ENST00000491967 SCN1AP35498 2009 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 OTOGLQ3ZCN5 2332 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 WDR27A2RRH5 827 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 CCL16O15467 120 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 PLCG1P19174 1290 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 ABCD1P33897 745 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 DDIT3P35638 169 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 UBA7P41226 1012 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 EPHA5P54756 1037 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 STARD6P59095 220 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 RAD51AP2Q09MP3 1159 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 SF3A1Q15459 793 aaKnown RBP9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 PRSS36Q5K4E3 855 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 SLC39A4Q6P5W5 647 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 NPAS3Q8IXF0 933 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 DTWD2Q8NBA8 298 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 RAD54LQ92698 747 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 ATOH1Q92858 354 aaPredicted RBP9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 CALML4Q96GE6 196 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 PLIN2Q99541 437 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 OXCT2Q9BYC2 517 aaPredicted RBP9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 UPF2Q9HAU5 1272 aaKnown RBP9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 HCFC1R1Q9NWW0 138 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 GDE1Q9NZC3 331 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 FBXL5Q9UKA1 691 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 PCDHB8Q9UN66 801 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 VPS13AQ96RL7 3174 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 ZNF292O60281 2723 aa9.14□□□□□ -0.95
SMARCB1-207ENST00000491967 CFAP54Q96N23 3096 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 SHISA7A6NL88 538 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms