RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 RARBP10826 455 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 COMTP21964 271 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 RASA3Q14644 834 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 P3H1Q32P28 736 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 FAM91A1Q658Y4 838 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 GJB7Q6PEY0 223 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 MAP7D3Q8IWC1 876 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.82□□□□□ -1.32
CCDC6-202ENST00000491922 CCDC110Q8TBZ0 833 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 CFAP57Q96MR6 1250 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 YIPF2Q9BWQ6 316 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 TRIM55Q9BYV6 548 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 ANKRD2Q9GZV1 360 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 RANBP17Q9H2T7 1088 aaKnown RBP6.82□□□□□ -1.32
CCDC6-202ENST00000491922 SSU72Q9NP77 194 aaKnown RBP6.82□□□□□ -1.32
CCDC6-202ENST00000491922 TAS2R1Q9NYW7 299 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 HEY2Q9UBP5 337 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 TRMT112Q9UI30 125 aaKnown RBP6.82□□□□□ -1.32
CCDC6-202ENST00000491922 ITGB1BP2Q9UKP3 347 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 GRID1Q9ULK0 1009 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 MTO1Q9Y2Z2 717 aaKnown RBP6.82□□□□□ -1.32
CCDC6-202ENST00000491922 COL18A1P39060 1754 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 EXOC1LA0A1B0GW35 172 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 TCRBV7S2A1N4TA0A589 114 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 TMEM110-MUSTN1A8MSY1 372 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 FKBP6O75344 327 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 MTA2O94776 668 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 CPA3P15088 417 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 CHRNB2P17787 502 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 CA4P22748 312 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 AMPD1P23109 780 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 IVDP26440 423 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 GRIA2P42262 883 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 CD97P48960 835 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 SERPINB8P50452 374 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 PSMD7P51665 324 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 ARFIP2P53365 341 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 CDK16Q00536 496 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 ZBTB16Q05516 673 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 TMEM62Q0P6H9 643 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 DCTN2Q13561 401 aaKnown RBP6.82□□□□□ -1.32
CCDC6-202ENST00000491922 DRAP1Q14919 205 aaPredicted RBP6.82□□□□□ -1.32
CCDC6-202ENST00000491922 KNOP1Q1ED39 458 aaKnown RBP6.82□□□□□ -1.32
CCDC6-202ENST00000491922 SGO2Q562F6 1265 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 HSP90AA5PQ58FG0 334 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 TMCO4Q5TGY1 634 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 GPBP1Q86WP2 473 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 LRRC6Q86X45 466 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 PDSS2Q86YH6 399 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 SDR16C5Q8N3Y7 309 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 OR6Y1Q8NGX8 325 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 CD101Q93033 1021 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 ABTB1Q969K4 478 aaPredicted RBP6.82□□□□□ -1.32
CCDC6-202ENST00000491922 SLC35B4Q969S0 331 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 SLC35C1Q96A29 364 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 SKA1Q96BD8 255 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 FAM161BQ96MY7 647 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 POP1Q99575 1024 aaKnown RBP6.82□□□□□ -1.32
CCDC6-202ENST00000491922 CRNKL1Q9BZJ0 848 aaKnown RBP6.82□□□□□ -1.32
CCDC6-202ENST00000491922 EBF3Q9H4W6 596 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 PPCSQ9HAB8 311 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 SEPT11Q9NVA2 429 aaKnown RBP6.82□□□□□ -1.32
CCDC6-202ENST00000491922 NUB1Q9Y5A7 615 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 TOGARAM1Q9Y4F4 1720 aa6.82□□□□□ -1.32
CCDC6-202ENST00000491922 GSTTP1A0A1W2PQM5 241 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 RBM47A0AV96 593 aaKnown RBP6.81□□□□□ -1.32
CCDC6-202ENST00000491922 SNAP23O00161 211 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 NDC80O14777 642 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 BIRC5O15392 142 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 AP1G1O43747 822 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 SLC37A4O43826 429 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 AKAP3O75969 853 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 KRT18P05783 430 aaKnown RBP6.81□□□□□ -1.32
CCDC6-202ENST00000491922 PLA2G4BP0C869 781 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 HARSP12081 509 aaKnown RBP6.81□□□□□ -1.32
CCDC6-202ENST00000491922 UQCRBP14927 111 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 KRT15P19012 456 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 RPA3P35244 121 aaPredicted RBP6.81□□□□□ -1.32
CCDC6-202ENST00000491922 ACTR3P61158 418 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 GPC5P78333 572 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 GPSM2P81274 684 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 ARHGAP4P98171 946 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 TFAP4Q01664 338 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 UBE4AQ14139 1066 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 KIF22Q14807 665 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 SLC1A5Q15758 541 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 ADRM1Q16186 407 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 ECM1Q16610 540 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 SLC44A4Q53GD3 710 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 CCDC92Q53HC0 331 aaPredicted RBP6.81□□□□□ -1.32
CCDC6-202ENST00000491922 PLEKHG4Q58EX7 1191 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 RBM26Q5T8P6 1007 aaKnown RBP6.81□□□□□ -1.32
CCDC6-202ENST00000491922 MAP3K21Q5TCX8 1036 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 AAGABQ6PD74 315 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 SATL1Q86VE3 508 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 RASSF3Q86WH2 238 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 TMPRSS6Q8IU80 811 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 THEMISQ8N1K5 641 aaPredicted RBP6.81□□□□□ -1.32
CCDC6-202ENST00000491922 LARGE2Q8N3Y3 721 aa6.81□□□□□ -1.32
CCDC6-202ENST00000491922 LBHD1Q9BQE6 289 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms