RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 VPS37AQ8NEZ2 397 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 KLHDC4Q8TBB5 520 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 ZNF480Q8WV37 535 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 ARL8AQ96BM9 186 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 PLEKHG4BQ96PX9 1271 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 GPHA2Q96T91 129 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 CDC5LQ99459 802 aaKnown RBP5.35□□□□□ -1.55
XRN1-213ENST00000489241 C7orf25Q9BPX7 421 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 TCF25Q9BQ70 676 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 APOL5Q9BWW9 433 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 RSAD1Q9HA92 442 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 PLCB1Q9NQ66 1216 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 GPRC5DQ9NZD1 345 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 DMTF1Q9Y222 760 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 PCDHB1Q9Y5F3 818 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 PCDHA13Q9Y5I0 950 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 CFAP20Q9Y6A4 193 aaKnown RBP5.35□□□□□ -1.55
XRN1-213ENST00000489241 CAPN8A6NHC0 703 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 ZKSCAN1P17029 563 aaPredicted RBP5.34□□□□□ -1.55
XRN1-213ENST00000489241 PEX2P28328 305 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 CRHR1P34998 444 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 IL12RB1P42701 662 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 CACNB3P54284 484 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 TGFB2P61812 414 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 ADAM8P78325 824 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 SEPT2Q15019 361 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 CNN3Q15417 329 aaKnown RBP5.34□□□□□ -1.55
XRN1-213ENST00000489241 ZRSR2Q15696 482 aaKnown RBP5.34□□□□□ -1.55
XRN1-213ENST00000489241 INO80DQ53TQ3 878 aaPredicted RBP5.34□□□□□ -1.55
XRN1-213ENST00000489241 MIGA2Q7L4E1 593 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 DAAM2Q86T65 1068 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 SGMS1Q86VZ5 419 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 SKAP1Q86WV1 359 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 KRT78Q8N1N4 520 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 UHRF1Q96T88 793 aaPredicted RBP5.34□□□□□ -1.55
XRN1-213ENST00000489241 TBCBQ99426 244 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 MANSC1Q9H8J5 431 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 PPCSQ9HAB8 311 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 BCO1Q9HAY6 547 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 IL23AQ9NPF7 189 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 KMT5AQ9NQR1 393 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 STXBP5LQ9Y2K9 1186 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 NR2E3Q9Y5X4 410 aa5.34□□□□□ -1.55
XRN1-213ENST00000489241 WDR33Q9C0J8 1336 aaKnown RBP5.33□□□□□ -1.56
XRN1-213ENST00000489241 ABHD14A-ACY1A0A1B0GW23 586 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 KLRG2A4D1S0 409 aaPredicted RBP5.33□□□□□ -1.56
XRN1-213ENST00000489241 CAPN14A8MX76 684 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 TCEA3O75764 348 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 SETSIPP0DME0 302 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 TRAPPC10P48553 1259 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 APBA1Q02410 837 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 TUBA3CQ13748 450 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 MST1LQ2TV78 715 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 KRTAP5-3Q6L8H2 238 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 TUBA3EQ6PEY2 450 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 C1orf228Q6PIY5 440 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 FAM111BQ6SJ93 734 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 MAEAQ7L5Y9 396 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 OR7D4Q8NG98 312 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 PLBD2Q8NHP8 589 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.33□□□□□ -1.56
XRN1-213ENST00000489241 NSUN6Q8TEA1 469 aaKnown RBP5.33□□□□□ -1.56
XRN1-213ENST00000489241 LRTOMTQ8WZ04 291 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 HOXB13Q92826 284 aaPredicted RBP5.33□□□□□ -1.56
XRN1-213ENST00000489241 RGMAQ96B86 450 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 PGBD4Q96DM1 585 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 CYFIP2Q96F07 1278 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 TMEM176AQ96HP8 235 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 SGCZQ96LD1 299 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 MPHOSPH9Q99550 1183 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 EPC1Q9H2F5 836 aa5.33□□□□□ -1.56
XRN1-213ENST00000489241 ZNF703Q9H7S9 590 aaPredicted RBP5.33□□□□□ -1.56
XRN1-213ENST00000489241 AGO3Q9H9G7 860 aaKnown RBP5.33□□□□□ -1.56
XRN1-213ENST00000489241 A0A088AWK7 358 aa5.32□□□□□ -1.56
XRN1-213ENST00000489241 CCDC189A1A4V9 331 aa5.32□□□□□ -1.56
XRN1-213ENST00000489241 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
XRN1-213ENST00000489241 LRRC14BA6NHZ5 514 aa5.32□□□□□ -1.56
XRN1-213ENST00000489241 ITGA10O75578 1167 aa5.32□□□□□ -1.56
XRN1-213ENST00000489241 FTLP02792 175 aaPredicted RBP5.32□□□□□ -1.56
XRN1-213ENST00000489241 PTPN7P35236 360 aa5.32□□□□□ -1.56
XRN1-213ENST00000489241 CASRP41180 1078 aa5.32□□□□□ -1.56
XRN1-213ENST00000489241 PIK3CBP42338 1070 aa5.32□□□□□ -1.56
XRN1-213ENST00000489241 GZMKP49863 264 aa5.32□□□□□ -1.56
XRN1-213ENST00000489241 CHAF1AQ13111 956 aaPredicted RBP5.32□□□□□ -1.56
XRN1-213ENST00000489241 MFSD5Q6N075 450 aa5.32□□□□□ -1.56
XRN1-213ENST00000489241 TTC7BQ86TV6 843 aa5.32□□□□□ -1.56
XRN1-213ENST00000489241 CDK5RAP3Q96JB5 506 aa5.32□□□□□ -1.56
XRN1-213ENST00000489241 CCDC138Q96M89 665 aa5.32□□□□□ -1.56
XRN1-213ENST00000489241 NT5C1BQ96P26 610 aa5.32□□□□□ -1.56
XRN1-213ENST00000489241 DMRTA2Q96SC8 542 aa5.32□□□□□ -1.56
XRN1-213ENST00000489241 ATP6V0A4Q9HBG4 840 aa5.32□□□□□ -1.56
XRN1-213ENST00000489241 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.32□□□□□ -1.56
XRN1-213ENST00000489241 CFAP69A5D8W1 941 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 RASA4BC9J798 803 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 SLC16A6O15403 523 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 RASA4O43374 803 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 IL2RBP14784 551 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 PAX3P23760 479 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 SREBF1P36956 1147 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 PRIM2P49643 509 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms