RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 BEST2Q8NFU1 509 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 PIK3R5Q8WYR1 880 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 C18orf25Q96B23 403 aaPredicted RBP15.53■□□□□ 0.08
BRCA1-218ENST00000489037 CCDC34Q96HJ3 373 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 B3GALT6Q96L58 329 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 RIPOR3Q96MK2 946 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 NECTIN4Q96NY8 510 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 ADAM7Q9H2U9 754 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 SFXN1Q9H9B4 322 aa15.53■□□□□ 0.08
BRCA1-218ENST00000489037 CPSF3Q9UKF6 684 aaKnown RBP15.53■□□□□ 0.08
BRCA1-218ENST00000489037 ANK1P16157 1881 aa15.52■□□□□ 0.08
BRCA1-218ENST00000489037 PLXNA3P51805 1871 aa15.52■□□□□ 0.08
BRCA1-218ENST00000489037 PVALEFA0A1B0GWK0 134 aa15.52■□□□□ 0.08
BRCA1-218ENST00000489037 KIAA0391O15091 583 aaKnown RBP15.52■□□□□ 0.08
BRCA1-218ENST00000489037 PRPF6O94906 941 aaKnown RBP15.52■□□□□ 0.08
BRCA1-218ENST00000489037 C1RP00736 705 aa15.52■□□□□ 0.08
BRCA1-218ENST00000489037 GARTP22102 1010 aa15.52■□□□□ 0.08
BRCA1-218ENST00000489037 MCM4P33991 863 aa15.52■□□□□ 0.08
BRCA1-218ENST00000489037 MTHFRP42898 656 aa15.52■□□□□ 0.08
BRCA1-218ENST00000489037 SPAG1Q07617 926 aa15.52■□□□□ 0.08
BRCA1-218ENST00000489037 CBX2Q14781 532 aaPredicted RBP15.52■□□□□ 0.08
BRCA1-218ENST00000489037 RTP2Q5QGT7 225 aa15.52■□□□□ 0.08
BRCA1-218ENST00000489037 ATAT1Q5SQI0 421 aa15.52■□□□□ 0.08
BRCA1-218ENST00000489037 RARS2Q5T160 578 aaKnown RBP15.52■□□□□ 0.08
BRCA1-218ENST00000489037 PALB2Q86YC2 1186 aa15.52■□□□□ 0.08
BRCA1-218ENST00000489037 GLYCTKQ8IVS8 523 aa15.52■□□□□ 0.08
BRCA1-218ENST00000489037 CCDC47Q96A33 483 aaKnown RBP15.52■□□□□ 0.08
BRCA1-218ENST00000489037 PHF7Q9BWX1 381 aaPredicted RBP15.52■□□□□ 0.08
BRCA1-218ENST00000489037 S1PR5Q9H228 398 aa15.52■□□□□ 0.08
BRCA1-218ENST00000489037 BLZF1Q9H2G9 400 aa15.52■□□□□ 0.08
BRCA1-218ENST00000489037 ASB7Q9H672 318 aa15.52■□□□□ 0.08
BRCA1-218ENST00000489037 DERAQ9Y315 318 aa15.52■□□□□ 0.08
BRCA1-218ENST00000489037 A0A1W2PQ27 194 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 A0A1W2PQ64 194 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 A0A1W2PQD8 194 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 TISP43B9A030 160 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 EIF3DO15371 548 aaKnown RBP eCLIP15.51■□□□□ 0.07
BRCA1-218ENST00000489037 FAM189A1O60320 539 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 IL18RAPO95256 599 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 MYL1P05976 194 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 FGFR3P22607 806 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 CASP5P51878 434 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 ZP2Q05996 745 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 KCNA1Q09470 495 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 TMEM132DQ14C87 1099 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 ZBTB41Q5SVQ8 909 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 ARMCX5Q6P1M9 558 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 PRSS55Q6UWB4 352 aaPredicted RBP15.51■□□□□ 0.07
BRCA1-218ENST00000489037 ANKS3Q6ZW76 656 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 FSIP1Q8NA03 581 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 NOC3LQ8WTT2 800 aaKnown RBP15.51■□□□□ 0.07
BRCA1-218ENST00000489037 HDAC7Q8WUI4 952 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 CHAMP1Q96JM3 812 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 PLEKHA4Q9H4M7 779 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 MAN1C1Q9NR34 630 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 TUBGCP4Q9UGJ1 667 aa15.51■□□□□ 0.07
BRCA1-218ENST00000489037 UBE4BO95155 1302 aa15.5■□□□□ 0.07
BRCA1-218ENST00000489037 H7C4K7 107 aa15.5■□□□□ 0.07
BRCA1-218ENST00000489037 SYN3O14994 580 aa15.5■□□□□ 0.07
BRCA1-218ENST00000489037 MEFVO15553 781 aaPredicted RBP15.5■□□□□ 0.07
BRCA1-218ENST00000489037 ADRB2P07550 413 aa15.5■□□□□ 0.07
BRCA1-218ENST00000489037 RPL17P18621 184 aaKnown RBP15.5■□□□□ 0.07
BRCA1-218ENST00000489037 PAX3P23760 479 aa15.5■□□□□ 0.07
BRCA1-218ENST00000489037 LRPAP1P30533 357 aa15.5■□□□□ 0.07
BRCA1-218ENST00000489037 BRCC3P46736 316 aa15.5■□□□□ 0.07
BRCA1-218ENST00000489037 CUL4BQ13620 913 aa15.5■□□□□ 0.07
BRCA1-218ENST00000489037 JADE1Q6IE81 842 aa15.5■□□□□ 0.07
BRCA1-218ENST00000489037 C12orf76Q8N812 135 aaPredicted RBP15.5■□□□□ 0.07
BRCA1-218ENST00000489037 APPL2Q8NEU8 664 aa15.5■□□□□ 0.07
BRCA1-218ENST00000489037 LNX1Q8TBB1 728 aaPredicted RBP15.5■□□□□ 0.07
BRCA1-218ENST00000489037 SUSD6Q92537 303 aa15.5■□□□□ 0.07
BRCA1-218ENST00000489037 HPS3Q969F9 1004 aa15.5■□□□□ 0.07
BRCA1-218ENST00000489037 PAGE5Q96GU1 130 aa15.5■□□□□ 0.07
BRCA1-218ENST00000489037 FAM213AQ9BRX8 229 aa15.5■□□□□ 0.07
BRCA1-218ENST00000489037 GDPD2Q9HCC8 539 aa15.5■□□□□ 0.07
BRCA1-218ENST00000489037 EXOC1Q9NV70 894 aa15.5■□□□□ 0.07
BRCA1-218ENST00000489037 HPSEQ9Y251 543 aa15.5■□□□□ 0.07
BRCA1-218ENST00000489037 XIRP2A4UGR9 3374 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 ARHGEF37A1IGU5 675 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 I3L4J1 428 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 TGM5O43548 720 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 ACTN4O43707 911 aaKnown RBP15.49■□□□□ 0.07
BRCA1-218ENST00000489037 EXTL3O43909 919 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 TKTP29401 623 aaKnown RBP15.49■□□□□ 0.07
BRCA1-218ENST00000489037 CASP1P29466 404 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 ADSSP30520 456 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 NDUFA8P51970 172 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 PSMD2Q13200 908 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 ZBTB6Q15916 424 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 SPATA1Q5VX52 437 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 TMC5Q6UXY8 1006 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 DSTYKQ6XUX3 929 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 NT5DC4Q86YG4 428 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 GRAMD1CQ8IYS0 662 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 C3orf58Q8NDZ4 430 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 ZNF507Q8TCN5 953 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 CACTINQ8WUQ7 758 aaKnown RBP15.49■□□□□ 0.07
BRCA1-218ENST00000489037 SAAL1Q96ER3 474 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 RPGRIP1Q96KN7 1286 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 SUSD3Q96L08 255 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms