RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 PRO3102Q9H379 93 aa16.33■□□□□ 0.2
CTNS-206ENST00000488623 C1orf112Q9NSG2 853 aa16.33■□□□□ 0.2
CTNS-206ENST00000488623 MIOSQ9NXC5 875 aa16.33■□□□□ 0.2
CTNS-206ENST00000488623 ZMYND8Q9ULU4 1186 aaPredicted RBP16.33■□□□□ 0.2
CTNS-206ENST00000488623 GIT1Q9Y2X7 761 aa16.33■□□□□ 0.2
CTNS-206ENST00000488623 C2CD2Q9Y426 696 aa16.33■□□□□ 0.2
CTNS-206ENST00000488623 PDCD11Q14690 1871 aaKnown RBP16.33■□□□□ 0.2
CTNS-206ENST00000488623 A0A1W2PQJ5 194 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 AKR1B15C9JRZ8 316 aaPredicted RBP16.32■□□□□ 0.2
CTNS-206ENST00000488623 PTGESO14684 152 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 TRIM21P19474 475 aaKnown RBP16.32■□□□□ 0.2
CTNS-206ENST00000488623 IBSPP21815 317 aaPredicted RBP16.32■□□□□ 0.2
CTNS-206ENST00000488623 RFC2P35250 354 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 RANBP2P49792 3224 aaKnown RBP16.32■□□□□ 0.2
CTNS-206ENST00000488623 AFF1P51825 1210 aaKnown RBP16.32■□□□□ 0.2
CTNS-206ENST00000488623 GUCY2FP51841 1108 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 POLR2FP61218 127 aaKnown RBP16.32■□□□□ 0.2
CTNS-206ENST00000488623 LRMPQ12912 555 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 NCOA4Q13772 614 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 GLRA4Q5JXX5 417 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 PHLDB3Q6NSJ2 640 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 ARHGEF19Q8IW93 802 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 C1orf127Q8N9H9 656 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 TC2NQ8N9U0 490 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 GSTCDQ8NEC7 633 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 TATDN2Q93075 761 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 C18orf25Q96B23 403 aaPredicted RBP16.32■□□□□ 0.2
CTNS-206ENST00000488623 PGBD4Q96DM1 585 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 IQCDQ96DY2 449 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 ZFP42Q96MM3 310 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 TSPAN18Q96SJ8 248 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 GAD1Q99259 594 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 PI4K2AQ9BTU6 479 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 EDEM3Q9BZQ6 932 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.32■□□□□ 0.23e-13■■■■■ 511.3
CTNS-206ENST00000488623 DPP3Q9NY33 737 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 SIX4Q9UIU6 781 aa16.32■□□□□ 0.2
CTNS-206ENST00000488623 AJAP1Q9UKB5 411 aaPredicted RBP16.32■□□□□ 0.2
CTNS-206ENST00000488623 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.31■□□□□ 0.2
CTNS-206ENST00000488623 EOMESO95936 686 aa16.31■□□□□ 0.2
CTNS-206ENST00000488623 UCHL3P15374 230 aa16.31■□□□□ 0.2
CTNS-206ENST00000488623 RAG1P15918 1043 aa16.31■□□□□ 0.2
CTNS-206ENST00000488623 PIK3CAP42336 1068 aa16.31■□□□□ 0.2
CTNS-206ENST00000488623 GSDMDP57764 484 aa16.31■□□□□ 0.2
CTNS-206ENST00000488623 MYL6P60660 151 aa16.31■□□□□ 0.2
CTNS-206ENST00000488623 IQCEQ6IPM2 695 aa16.31■□□□□ 0.2
CTNS-206ENST00000488623 MFSD5Q6N075 450 aa16.31■□□□□ 0.2
CTNS-206ENST00000488623 RNF169Q8NCN4 708 aa16.31■□□□□ 0.2
CTNS-206ENST00000488623 BAP1Q92560 729 aa16.31■□□□□ 0.2
CTNS-206ENST00000488623 NAA15Q9BXJ9 866 aaKnown RBP16.31■□□□□ 0.2
CTNS-206ENST00000488623 NLRC4Q9NPP4 1024 aa16.31■□□□□ 0.2
CTNS-206ENST00000488623 CEP72Q9P209 647 aa16.31■□□□□ 0.2
CTNS-206ENST00000488623 PCDH10Q9P2E7 1040 aa16.31■□□□□ 0.2
CTNS-206ENST00000488623 FBXL5Q9UKA1 691 aa16.31■□□□□ 0.2
CTNS-206ENST00000488623 DNAJC12Q9UKB3 198 aa16.31■□□□□ 0.2
CTNS-206ENST00000488623 LUC7L2Q9Y383 392 aaKnown RBP16.31■□□□□ 0.2
CTNS-206ENST00000488623 FHOD1Q9Y613 1164 aa16.31■□□□□ 0.2
CTNS-206ENST00000488623 ARL5CA6NH57 179 aa16.3■□□□□ 0.2
CTNS-206ENST00000488623 MFAP3LO75121 409 aa16.3■□□□□ 0.2
CTNS-206ENST00000488623 OFD1O75665 1012 aa16.3■□□□□ 0.2
CTNS-206ENST00000488623 TPM1P09493 284 aa16.3■□□□□ 0.2
CTNS-206ENST00000488623 SYN1P17600 705 aa16.3■□□□□ 0.2
CTNS-206ENST00000488623 KRT9P35527 623 aa16.3■□□□□ 0.2
CTNS-206ENST00000488623 MLH1P40692 756 aa16.3■□□□□ 0.2
CTNS-206ENST00000488623 ZBED6P86452 979 aa16.3■□□□□ 0.2
CTNS-206ENST00000488623 TRPC3Q13507 836 aa16.3■□□□□ 0.2
CTNS-206ENST00000488623 CNKSR3Q6P9H4 555 aa16.3■□□□□ 0.2
CTNS-206ENST00000488623 HELQQ8TDG4 1101 aa16.3■□□□□ 0.2
CTNS-206ENST00000488623 ZNF830Q96NB3 372 aaPredicted RBP16.3■□□□□ 0.2
CTNS-206ENST00000488623 PPP1R10Q96QC0 940 aaKnown RBP16.3■□□□□ 0.2
CTNS-206ENST00000488623 RSAD1Q9HA92 442 aa16.3■□□□□ 0.2
CTNS-206ENST00000488623 APOBEC3GQ9HC16 384 aaKnown RBP16.3■□□□□ 0.2
CTNS-206ENST00000488623 UBE2TQ9NPD8 197 aaPredicted RBP16.3■□□□□ 0.2
CTNS-206ENST00000488623 UBN1Q9NPG3 1134 aa16.3■□□□□ 0.2
CTNS-206ENST00000488623 APEX2Q9UBZ4 518 aa16.3■□□□□ 0.2
CTNS-206ENST00000488623 TUBGCP4Q9UGJ1 667 aa16.3■□□□□ 0.2
CTNS-206ENST00000488623 UBQLN1Q9UMX0 589 aaKnown RBP16.3■□□□□ 0.2
CTNS-206ENST00000488623 PLAGL2Q9UPG8 496 aa16.3■□□□□ 0.2
CTNS-206ENST00000488623 ZC3H11AO75152 810 aaKnown RBP eCLIP16.29■□□□□ 0.2
CTNS-206ENST00000488623 ITGB3P05106 788 aa16.29■□□□□ 0.2
CTNS-206ENST00000488623 CSF2RAP15509 400 aa16.29■□□□□ 0.2
CTNS-206ENST00000488623 SOX4Q06945 474 aaPredicted RBP16.29■□□□□ 0.2
CTNS-206ENST00000488623 SGSM1Q2NKQ1 1148 aa16.29■□□□□ 0.2
CTNS-206ENST00000488623 WDR44Q5JSH3 913 aa16.29■□□□□ 0.2
CTNS-206ENST00000488623 SPOPLQ6IQ16 392 aa16.29■□□□□ 0.2
CTNS-206ENST00000488623 PDXDC1Q6P996 788 aa16.29■□□□□ 0.2
CTNS-206ENST00000488623 RRAGAQ7L523 313 aa16.29■□□□□ 0.2
CTNS-206ENST00000488623 CACNA2D4Q7Z3S7 1137 aa16.29■□□□□ 0.2
CTNS-206ENST00000488623 LRRC8AQ8IWT6 810 aa16.29■□□□□ 0.2
CTNS-206ENST00000488623 TMEM199Q8N511 208 aa16.29■□□□□ 0.2
CTNS-206ENST00000488623 BEST2Q8NFU1 509 aa16.29■□□□□ 0.2
CTNS-206ENST00000488623 OR8K1Q8NGG5 319 aa16.29■□□□□ 0.2
CTNS-206ENST00000488623 KAT5Q92993 513 aa16.29■□□□□ 0.2
CTNS-206ENST00000488623 NT5C1BQ96P26 610 aa16.29■□□□□ 0.2
CTNS-206ENST00000488623 XYLT2Q9H1B5 865 aa16.29■□□□□ 0.2
CTNS-206ENST00000488623 ELAC1Q9H777 363 aaKnown RBP16.29■□□□□ 0.2
CTNS-206ENST00000488623 ITGA11Q9UKX5 1188 aa16.29■□□□□ 0.2
CTNS-206ENST00000488623 AGAP1Q9UPQ3 857 aa16.29■□□□□ 0.2
CTNS-206ENST00000488623 TTC3P53804 2025 aa16.28■□□□□ 0.2
CTNS-206ENST00000488623 INPPL1O15357 1258 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms