RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 NOLC1Q14978 699 aaKnown RBP eCLIP12.29□□□□□ -0.44
VAMP7-206ENST00000488344 KYAT1Q16773 422 aa12.29□□□□□ -0.44
VAMP7-206ENST00000488344 HYIQ5T013 277 aa12.29□□□□□ -0.44
VAMP7-206ENST00000488344 TPGS2Q68CL5 300 aa12.29□□□□□ -0.44
VAMP7-206ENST00000488344 ALKAL1Q6UXT8 129 aa12.29□□□□□ -0.44
VAMP7-206ENST00000488344 ZPBP2Q6X784 338 aa12.29□□□□□ -0.44
VAMP7-206ENST00000488344 FRMD5Q7Z6J6 570 aa12.29□□□□□ -0.44
VAMP7-206ENST00000488344 DAW1Q8N136 415 aa12.29□□□□□ -0.44
VAMP7-206ENST00000488344 ELMOD1Q8N336 334 aa12.29□□□□□ -0.44
VAMP7-206ENST00000488344 APPL2Q8NEU8 664 aa12.29□□□□□ -0.44
VAMP7-206ENST00000488344 ZNF461Q8TAF7 563 aa12.29□□□□□ -0.44
VAMP7-206ENST00000488344 KIF2CQ99661 725 aa12.29□□□□□ -0.44
VAMP7-206ENST00000488344 AVENQ9NQS1 362 aaPredicted RBP12.29□□□□□ -0.44
VAMP7-206ENST00000488344 GDE1Q9NZC3 331 aa12.29□□□□□ -0.44
VAMP7-206ENST00000488344 LARSQ9P2J5 1176 aaKnown RBP12.29□□□□□ -0.44
VAMP7-206ENST00000488344 MRPS23Q9Y3D9 190 aaKnown RBP12.29□□□□□ -0.44
VAMP7-206ENST00000488344 TDRD15B5MCY1 1934 aaKnown RBP12.29□□□□□ -0.44
VAMP7-206ENST00000488344 PP2D1A8MPX8 630 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 ZNF197O14709 1029 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 SLC16A4O15374 487 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 CLDN3O15551 220 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 ADAM12O43184 909 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 XPOTO43592 962 aaKnown RBP12.28□□□□□ -0.44
VAMP7-206ENST00000488344 MAGEA9P43362 315 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 BRCC3P46736 316 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 MAPK7Q13164 816 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 ZRSR1Q15695 479 aaKnown RBP12.28□□□□□ -0.44
VAMP7-206ENST00000488344 VARS2Q5ST30 1063 aaKnown RBP12.28□□□□□ -0.44
VAMP7-206ENST00000488344 ZNF280DQ6N043 979 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 RSPO2Q6UXX9 243 aaPredicted RBP12.28□□□□□ -0.44
VAMP7-206ENST00000488344 ASCL5Q7RTU5 278 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 CEP120Q8N960 986 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 SYT2Q8N9I0 419 aaPredicted RBP12.28□□□□□ -0.44
VAMP7-206ENST00000488344 FGF14Q92915 247 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 BORCS6Q96GS4 357 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 AK8Q96MA6 479 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 OXCT2Q9BYC2 517 aaPredicted RBP12.28□□□□□ -0.44
VAMP7-206ENST00000488344 PLEKHA5Q9HAU0 1116 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 GOLGA2P5Q9HBQ8 144 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 POLD4Q9HCU8 107 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 ANKFY1Q9P2R3 1169 aa12.28□□□□□ -0.44
VAMP7-206ENST00000488344 ARHGEF37A1IGU5 675 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 RHOP08100 348 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 HARSP12081 509 aaKnown RBP12.27□□□□□ -0.45
VAMP7-206ENST00000488344 ATF2P15336 505 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 PTPN2P17706 415 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 PAX3P23760 479 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 MARCKSP29966 332 aaPredicted RBP12.27□□□□□ -0.45
VAMP7-206ENST00000488344 CDC25AP30304 524 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 MCM4P33991 863 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 MATR3P43243 847 aaKnown RBP eCLIP12.27□□□□□ -0.453e-6■■■■□ 23.9
VAMP7-206ENST00000488344 STARD6P59095 220 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 NTHL1P78549 312 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 FOXK2Q01167 660 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 ROR1Q01973 937 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 MCL1Q07820 350 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 C8orf34Q49A92 452 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 CTXN3Q4LDR2 81 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 IQCEQ6IPM2 695 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 PARM1Q6UWI2 310 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 TAS1R3Q7RTX0 852 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 NPAS3Q8IXF0 933 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 TCEAL8Q8IYN2 117 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 LEMD2Q8NC56 503 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 C3orf58Q8NDZ4 430 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 TMEM161BQ8NDZ6 487 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 PJA1Q8NG27 643 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 ITFG1Q8TB96 612 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 BICD1Q96G01 975 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 CALML4Q96GE6 196 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 SUSD3Q96L08 255 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 TSPAN18Q96SJ8 248 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 MMTAG2Q9BU76 263 aaKnown RBP12.27□□□□□ -0.45
VAMP7-206ENST00000488344 OSBPL6Q9BZF3 934 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 CXCL16Q9H2A7 254 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 DNMT3BQ9UBC3 853 aaKnown RBP12.27□□□□□ -0.45
VAMP7-206ENST00000488344 ODF2LQ9ULJ1 636 aa12.27□□□□□ -0.45
VAMP7-206ENST00000488344 ZFHX2Q9C0A1 2572 aaPredicted RBP12.26□□□□□ -0.45
VAMP7-206ENST00000488344 PLXNA3P51805 1871 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 KANSL1LA0AUZ9 987 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 VWA3AA6NCI4 1184 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 I3L4J1 428 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 ABLIM1O14639 778 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 NCAM2O15394 837 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 ECI2O75521 394 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 MICAL2O94851 1124 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 ABLIM3O94929 683 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 CLTAP09496 248 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 PLA2G4BP0C869 781 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 MAPTP10636 758 aaKnown RBP12.26□□□□□ -0.45
VAMP7-206ENST00000488344 GPC5P78333 572 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 SOX4Q06945 474 aaPredicted RBP12.26□□□□□ -0.45
VAMP7-206ENST00000488344 MLF2Q15773 248 aaPredicted RBP12.26□□□□□ -0.45
VAMP7-206ENST00000488344 IL17AQ16552 155 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 SPECC1Q5M775 1068 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 CD300LGQ6UXG3 332 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 KCNK18Q7Z418 384 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 C1orf210Q8IVY1 113 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 KCNN1Q92952 543 aa12.26□□□□□ -0.45
VAMP7-206ENST00000488344 TMX3Q96JJ7 454 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms