RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ZNF185O15231 689 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 ALDH1A2O94788 518 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 LY86O95711 162 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 HKR1P10072 659 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 C5AR1P21730 350 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 RNASE9P60153 205 aaKnown RBP4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 DUSP2Q05923 314 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 MGAT2Q10469 447 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 RRP12Q5JTH9 1297 aaKnown RBP4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 TCEAL8Q8IYN2 117 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 SIMC1Q8NDZ2 872 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 CPEB3Q8NE35 698 aaKnown RBP4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 PIK3C3Q8NEB9 887 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 GPR156Q8NFN8 814 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 PPP1R14CQ8TAE6 165 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 RIN2Q8WYP3 895 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 SLC2A13Q96QE2 648 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 CDC5LQ99459 802 aaKnown RBP4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 MAP3K14Q99558 947 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 PDCD2LQ9BRP1 358 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 SOX7Q9BT81 388 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 TEX101Q9BY14 249 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 RHOBTB2Q9BYZ6 727 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 A0A1W2PR48 441 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 PCDHGA12O60330 932 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 C1RP00736 705 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 GASTP01350 101 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 GSPT1P15170 499 aaKnown RBP4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 MCAMP43121 646 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 GUCY1B3Q02153 619 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 CD69Q07108 199 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 HLTFQ14527 1009 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 MLC1Q15049 377 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 NOMO1Q15155 1222 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 BEAN1Q3B7T3 259 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 C19orf54Q5BKX5 351 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 METTL24Q5JXM2 366 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 PPP4R4Q6NUP7 873 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 TAS1R1Q7RTX1 841 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 SLC41A1Q8IVJ1 513 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 SNX33Q8WV41 574 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 LINC00476Q8WZB0 136 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 NELL1Q92832 810 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 CYFIP2Q96F07 1278 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 IL17RAQ96F46 866 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 C8orf48Q96LL4 319 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 DCLRE1CQ96SD1 692 aaKnown RBP4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 RTFDC1Q9BY42 306 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 KMT5AQ9NQR1 393 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 MAN1C1Q9NR34 630 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 INTUQ9ULD6 942 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 NOB1Q9ULX3 412 aaKnown RBP4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 FRMD4BQ9Y2L6 1034 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 CHST2Q9Y4C5 530 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 PCDHGA9Q9Y5G4 932 aaKnown RBP4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 PCDHGA8Q9Y5G5 932 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 PCDHGA7Q9Y5G6 932 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 PCDHGA6Q9Y5G7 932 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 PCDHGA3Q9Y5H0 932 aa4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 CFAP20Q9Y6A4 193 aaKnown RBP4.82□□□□□ -1.64
HMGB1P36-201ENST00000487709 GAGE12BA1L429 117 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 GAGE12HA6NDE8 117 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 MYADML2A6NDP7 307 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 TEX33O43247 280 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 CTSSP25774 331 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 CRHR1P34998 444 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 NHLH2Q02577 135 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 TP53BP2Q13625 1128 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 CCDC157Q569K6 752 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 TTC7BQ86TV6 843 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 RSPH3Q86UC2 560 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 PLXDC1Q8IUK5 500 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 LYSMD2Q8IV50 215 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 CAMKK1Q8N5S9 505 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 MAGEB6Q8N7X4 407 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 COQ10AQ96MF6 247 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 FDXACB1Q9BRP7 624 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 LRFN3Q9BTN0 628 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 PRDM12Q9H4Q4 367 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 BCO1Q9HAY6 547 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 SPON1Q9HCB6 807 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 PRDM11Q9NQV5 511 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 LANCL2Q9NS86 450 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 TMEM140Q9NV12 185 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 RNF7Q9UBF6 113 aa4.81□□□□□ -1.64
HMGB1P36-201ENST00000487709 PRR5-ARHGAP8B1AHC4 643 aa4.8□□□□□ -1.64
HMGB1P36-201ENST00000487709 ARIH2O95376 493 aa4.8□□□□□ -1.64
HMGB1P36-201ENST00000487709 WASP42768 502 aa4.8□□□□□ -1.64
HMGB1P36-201ENST00000487709 ELLP55199 621 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P36-201ENST00000487709 MRPL49Q13405 166 aaKnown RBP4.8□□□□□ -1.64
HMGB1P36-201ENST00000487709 MST1LQ2TV78 715 aa4.8□□□□□ -1.64
HMGB1P36-201ENST00000487709 RHOT1Q8IXI2 618 aa4.8□□□□□ -1.64
HMGB1P36-201ENST00000487709 SLC44A3Q8N4M1 653 aa4.8□□□□□ -1.64
HMGB1P36-201ENST00000487709 FAM98AQ8NCA5 519 aaKnown RBP4.8□□□□□ -1.64
HMGB1P36-201ENST00000487709 NRG4Q8WWG1 115 aa4.8□□□□□ -1.64
HMGB1P36-201ENST00000487709 ASB10Q8WXI3 467 aa4.8□□□□□ -1.64
HMGB1P36-201ENST00000487709 MTFMTQ96DP5 389 aaKnown RBP4.8□□□□□ -1.64
HMGB1P36-201ENST00000487709 LRGUKQ96M69 825 aa4.8□□□□□ -1.64
HMGB1P36-201ENST00000487709 SENP6Q9GZR1 1112 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P36-201ENST00000487709 FAM204AQ9H8W3 233 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms