RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 C8orf34Q49A92 452 aa15.03■□□□□ -0
SCAF4-206ENST00000485790 VARS2Q5ST30 1063 aaKnown RBP15.03■□□□□ -0
SCAF4-206ENST00000485790 CYP4A22Q5TCH4 519 aa15.03■□□□□ -0
SCAF4-206ENST00000485790 LARP1BQ659C4 914 aaKnown RBP15.03■□□□□ -0
SCAF4-206ENST00000485790 TPGS2Q68CL5 300 aa15.03■□□□□ -0
SCAF4-206ENST00000485790 CWF19L1Q69YN2 538 aaKnown RBP15.03■□□□□ -0
SCAF4-206ENST00000485790 SLC8B1Q6J4K2 584 aa15.03■□□□□ -0
SCAF4-206ENST00000485790 PARM1Q6UWI2 310 aa15.03■□□□□ -0
SCAF4-206ENST00000485790 FRMD5Q7Z6J6 570 aa15.03■□□□□ -0
SCAF4-206ENST00000485790 ELMOD1Q8N336 334 aa15.03■□□□□ -0
SCAF4-206ENST00000485790 TMEM161BQ8NDZ6 487 aa15.03■□□□□ -0
SCAF4-206ENST00000485790 KCNG4Q8TDN1 519 aa15.03■□□□□ -0
SCAF4-206ENST00000485790 BICD1Q96G01 975 aa15.03■□□□□ -0
SCAF4-206ENST00000485790 TSPAN18Q96SJ8 248 aa15.03■□□□□ -0
SCAF4-206ENST00000485790 PLIN2Q99541 437 aa15.03■□□□□ -0
SCAF4-206ENST00000485790 MMTAG2Q9BU76 263 aaKnown RBP15.03■□□□□ -0
SCAF4-206ENST00000485790 OXCT2Q9BYC2 517 aaPredicted RBP15.03■□□□□ -0
SCAF4-206ENST00000485790 GOLGA2P5Q9HBQ8 144 aa15.03■□□□□ -0
SCAF4-206ENST00000485790 CNTN3Q9P232 1028 aa15.03■□□□□ -0
SCAF4-206ENST00000485790 ABLIM3O94929 683 aa15.02■□□□□ -0
SCAF4-206ENST00000485790 MAPTP10636 758 aaKnown RBP15.02■□□□□ -0
SCAF4-206ENST00000485790 ATF2P15336 505 aa15.02■□□□□ -0
SCAF4-206ENST00000485790 NOLC1Q14978 699 aaKnown RBP eCLIP15.02■□□□□ -0
SCAF4-206ENST00000485790 CTXN3Q4LDR2 81 aa15.02■□□□□ -0
SCAF4-206ENST00000485790 SLC44A4Q53GD3 710 aa15.02■□□□□ -0
SCAF4-206ENST00000485790 IQCEQ6IPM2 695 aa15.02■□□□□ -0
SCAF4-206ENST00000485790 CD300LGQ6UXG3 332 aa15.02■□□□□ -0
SCAF4-206ENST00000485790 KCNK18Q7Z418 384 aa15.02■□□□□ -0
SCAF4-206ENST00000485790 CEP120Q8N960 986 aa15.02■□□□□ -0
SCAF4-206ENST00000485790 RASSF8Q8NHQ8 419 aa15.02■□□□□ -0
SCAF4-206ENST00000485790 ITFG1Q8TB96 612 aa15.02■□□□□ -0
SCAF4-206ENST00000485790 SNX27Q96L92 541 aa15.02■□□□□ -0
SCAF4-206ENST00000485790 ZNF512Q96ME7 567 aaPredicted RBP15.02■□□□□ -0
SCAF4-206ENST00000485790 ZMAT2Q96NC0 199 aaKnown RBP15.02■□□□□ -0
SCAF4-206ENST00000485790 NELL2Q99435 816 aa15.02■□□□□ -0
SCAF4-206ENST00000485790 CYP4F11Q9HBI6 524 aa15.02■□□□□ -0
SCAF4-206ENST00000485790 ANKFY1Q9P2R3 1169 aa15.02■□□□□ -0
SCAF4-206ENST00000485790 DNMT3BQ9UBC3 853 aaKnown RBP15.02■□□□□ -0
SCAF4-206ENST00000485790 XPOTO43592 962 aaKnown RBP15.01□□□□□ -0.01
SCAF4-206ENST00000485790 KRT18P05783 430 aaKnown RBP15.01□□□□□ -0.01
SCAF4-206ENST00000485790 IGFBP6P24592 240 aaPredicted RBP15.01□□□□□ -0.01
SCAF4-206ENST00000485790 MCM4P33991 863 aa15.01□□□□□ -0.01
SCAF4-206ENST00000485790 SLC12A3P55017 1021 aa15.01□□□□□ -0.01
SCAF4-206ENST00000485790 STARD6P59095 220 aa15.01□□□□□ -0.01
SCAF4-206ENST00000485790 PRKCQQ04759 706 aa15.01□□□□□ -0.01
SCAF4-206ENST00000485790 SOX4Q06945 474 aaPredicted RBP15.01□□□□□ -0.01
SCAF4-206ENST00000485790 MAPK7Q13164 816 aa15.01□□□□□ -0.01
SCAF4-206ENST00000485790 SLC10A6Q3KNW5 377 aa15.01□□□□□ -0.01
SCAF4-206ENST00000485790 SPECC1Q5M775 1068 aa15.01□□□□□ -0.01
SCAF4-206ENST00000485790 RSPO2Q6UXX9 243 aaPredicted RBP15.01□□□□□ -0.01
SCAF4-206ENST00000485790 TAS1R3Q7RTX0 852 aa15.01□□□□□ -0.01
SCAF4-206ENST00000485790 HAUS6Q7Z4H7 955 aa15.01□□□□□ -0.01
SCAF4-206ENST00000485790 TCEAL8Q8IYN2 117 aa15.01□□□□□ -0.01
SCAF4-206ENST00000485790 MYCT1Q8N699 235 aa15.01□□□□□ -0.01
SCAF4-206ENST00000485790 FGF14Q92915 247 aa15.01□□□□□ -0.01
SCAF4-206ENST00000485790 ZBTB45Q96K62 511 aaPredicted RBP15.01□□□□□ -0.01
SCAF4-206ENST00000485790 PNMA5Q96PV4 448 aa15.01□□□□□ -0.01
SCAF4-206ENST00000485790 RPP25Q9BUL9 199 aaKnown RBP15.01□□□□□ -0.01
SCAF4-206ENST00000485790 AVENQ9NQS1 362 aaPredicted RBP15.01□□□□□ -0.01
SCAF4-206ENST00000485790 ODF2LQ9ULJ1 636 aa15.01□□□□□ -0.01
SCAF4-206ENST00000485790 ARHGEF37A1IGU5 675 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 PRR23AA6NEV1 266 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 NCAM2O15394 837 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 ECI2O75521 394 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 MICAL2O94851 1124 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 RHOP08100 348 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 PAX3P23760 479 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 LIG4P49917 911 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 ROR1Q01973 937 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 MCL1Q07820 350 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 SNW1Q13573 536 aaKnown RBP15□□□□□ -0.01
SCAF4-206ENST00000485790 MRPL58Q14197 206 aaKnown RBP15□□□□□ -0.01
SCAF4-206ENST00000485790 ZNF280DQ6N043 979 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 ZC3H14Q6PJT7 736 aaKnown RBP15□□□□□ -0.01
SCAF4-206ENST00000485790 ASCL5Q7RTU5 278 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 USP37Q86T82 979 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 C1orf210Q8IVY1 113 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 C3orf58Q8NDZ4 430 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 C18orf25Q96B23 403 aaPredicted RBP15□□□□□ -0.01
SCAF4-206ENST00000485790 MCRS1Q96EZ8 462 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 BORCS6Q96GS4 357 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 SUSD3Q96L08 255 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 TBC1D32Q96NH3 1257 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 BCO2Q9BYV7 579 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 FBXL5Q9UKA1 691 aa15□□□□□ -0.01
SCAF4-206ENST00000485790 KANSL1LA0AUZ9 987 aa14.99□□□□□ -0.01
SCAF4-206ENST00000485790 TBC1D4O60343 1298 aa14.99□□□□□ -0.01
SCAF4-206ENST00000485790 FAM13AO94988 1023 aa14.99□□□□□ -0.01
SCAF4-206ENST00000485790 DCNP07585 359 aaKnown RBP14.99□□□□□ -0.01
SCAF4-206ENST00000485790 CYP3A5P20815 502 aa14.99□□□□□ -0.01
SCAF4-206ENST00000485790 LONP1P36776 959 aaKnown RBP14.99□□□□□ -0.01
SCAF4-206ENST00000485790 DHX8Q14562 1220 aaKnown RBP14.99□□□□□ -0.01
SCAF4-206ENST00000485790 BRAPQ7Z569 592 aa14.99□□□□□ -0.01
SCAF4-206ENST00000485790 CD302Q8IX05 232 aa14.99□□□□□ -0.01
SCAF4-206ENST00000485790 NPAS3Q8IXF0 933 aa14.99□□□□□ -0.01
SCAF4-206ENST00000485790 LEMD2Q8NC56 503 aa14.99□□□□□ -0.01
SCAF4-206ENST00000485790 ST13P5Q8NFI4 369 aaPredicted RBP14.99□□□□□ -0.01
SCAF4-206ENST00000485790 CORO1BQ9BR76 489 aa14.99□□□□□ -0.01
SCAF4-206ENST00000485790 OSBPL6Q9BZF3 934 aa14.99□□□□□ -0.01
SCAF4-206ENST00000485790 RPF1Q9H9Y2 349 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms