RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TBC1D17Q9HA65 648 aa19.72■□□□□ 0.75
ATG4B-221ENST00000483778 CNTN3Q9P232 1028 aa19.72■□□□□ 0.75
ATG4B-221ENST00000483778 MIA3Q5JRA6 1907 aa19.72■□□□□ 0.75
ATG4B-221ENST00000483778 NRG2O14511 850 aaPredicted RBP19.71■□□□□ 0.75
ATG4B-221ENST00000483778 SEC24AO95486 1093 aa19.71■□□□□ 0.75
ATG4B-221ENST00000483778 HOXA9P31269 272 aa19.71■□□□□ 0.75
ATG4B-221ENST00000483778 NBL1P41271 181 aa19.71■□□□□ 0.75
ATG4B-221ENST00000483778 ANKS3Q6ZW76 656 aa19.71■□□□□ 0.75
ATG4B-221ENST00000483778 C17orf75Q9HAS0 396 aa19.71■□□□□ 0.75
ATG4B-221ENST00000483778 TOPORSQ9NS56 1045 aaPredicted RBP19.71■□□□□ 0.75
ATG4B-221ENST00000483778 ANKFY1Q9P2R3 1169 aa19.71■□□□□ 0.75
ATG4B-221ENST00000483778 WDR27A2RRH5 827 aa19.7■□□□□ 0.74
ATG4B-221ENST00000483778 H3BQV1 296 aa19.7■□□□□ 0.74
ATG4B-221ENST00000483778 LRRN2O75325 713 aa19.7■□□□□ 0.74
ATG4B-221ENST00000483778 ABLIM3O94929 683 aa19.7■□□□□ 0.74
ATG4B-221ENST00000483778 DCNP07585 359 aaKnown RBP19.7■□□□□ 0.74
ATG4B-221ENST00000483778 ARPP19P56211 112 aa19.7■□□□□ 0.74
ATG4B-221ENST00000483778 ROR1Q01973 937 aa19.7■□□□□ 0.74
ATG4B-221ENST00000483778 MRPL58Q14197 206 aaKnown RBP19.7■□□□□ 0.74
ATG4B-221ENST00000483778 DHX8Q14562 1220 aaKnown RBP19.7■□□□□ 0.74
ATG4B-221ENST00000483778 SLC5A9Q2M3M2 681 aa19.7■□□□□ 0.74
ATG4B-221ENST00000483778 UVSSAQ2YD98 709 aa19.7■□□□□ 0.74
ATG4B-221ENST00000483778 ZBTB41Q5SVQ8 909 aa19.7■□□□□ 0.74
ATG4B-221ENST00000483778 RTP3Q9BQQ7 232 aa19.7■□□□□ 0.74
ATG4B-221ENST00000483778 BLOC1S4Q9NUP1 217 aa19.7■□□□□ 0.74
ATG4B-221ENST00000483778 TUBGCP4Q9UGJ1 667 aa19.7■□□□□ 0.74
ATG4B-221ENST00000483778 KIF3AQ9Y496 699 aa19.7■□□□□ 0.74
ATG4B-221ENST00000483778 DMDP11532 3685 aa19.69■□□□□ 0.74
ATG4B-221ENST00000483778 TRAPPC3O43617 180 aa19.69■□□□□ 0.74
ATG4B-221ENST00000483778 XYLBO75191 536 aa19.69■□□□□ 0.74
ATG4B-221ENST00000483778 TOM1L1O75674 476 aa19.69■□□□□ 0.74
ATG4B-221ENST00000483778 CENPBP07199 599 aaPredicted RBP19.69■□□□□ 0.74
ATG4B-221ENST00000483778 TNFSF9P41273 254 aa19.69■□□□□ 0.74
ATG4B-221ENST00000483778 ANGPT1Q15389 498 aa19.69■□□□□ 0.74
ATG4B-221ENST00000483778 ARL6IP4Q66PJ3 421 aaKnown RBP19.69■□□□□ 0.74
ATG4B-221ENST00000483778 SLC8B1Q6J4K2 584 aa19.69■□□□□ 0.74
ATG4B-221ENST00000483778 NPAS3Q8IXF0 933 aa19.69■□□□□ 0.74
ATG4B-221ENST00000483778 ZNF461Q8TAF7 563 aa19.69■□□□□ 0.74
ATG4B-221ENST00000483778 KXD1Q9BQD3 176 aa19.69■□□□□ 0.74
ATG4B-221ENST00000483778 TIPINQ9BVW5 301 aa19.69■□□□□ 0.74
ATG4B-221ENST00000483778 PLA2G2FQ9BZM2 168 aa19.69■□□□□ 0.74
ATG4B-221ENST00000483778 FOXQ1Q9C009 403 aa19.69■□□□□ 0.74
ATG4B-221ENST00000483778 SLC2A4RGQ9NR83 387 aa19.69■□□□□ 0.74
ATG4B-221ENST00000483778 SLC38A7Q9NVC3 462 aa19.69■□□□□ 0.74
ATG4B-221ENST00000483778 DLGAP2Q9P1A6 1054 aa19.69■□□□□ 0.74
ATG4B-221ENST00000483778 SCN1AP35498 2009 aa19.68■□□□□ 0.74
ATG4B-221ENST00000483778 FANCMQ8IYD8 2048 aa19.68■□□□□ 0.74
ATG4B-221ENST00000483778 CXCL8P10145 99 aa19.68■□□□□ 0.74
ATG4B-221ENST00000483778 GLULP15104 373 aa19.68■□□□□ 0.74
ATG4B-221ENST00000483778 RPL9P32969 192 aaKnown RBP19.68■□□□□ 0.74
ATG4B-221ENST00000483778 GUCY2FP51841 1108 aa19.68■□□□□ 0.74
ATG4B-221ENST00000483778 MCL1Q07820 350 aa19.68■□□□□ 0.74
ATG4B-221ENST00000483778 STRN3Q13033 797 aa19.68■□□□□ 0.74
ATG4B-221ENST00000483778 MCM6Q14566 821 aa19.68■□□□□ 0.74
ATG4B-221ENST00000483778 NOLC1Q14978 699 aaKnown RBP eCLIP19.68■□□□□ 0.74
ATG4B-221ENST00000483778 PABPC1LQ4VXU2 614 aaKnown RBP19.68■□□□□ 0.74
ATG4B-221ENST00000483778 SPECC1Q5M775 1068 aa19.68■□□□□ 0.74
ATG4B-221ENST00000483778 LARP1BQ659C4 914 aaKnown RBP19.68■□□□□ 0.74
ATG4B-221ENST00000483778 HAUS6Q7Z4H7 955 aa19.68■□□□□ 0.74
ATG4B-221ENST00000483778 TCEAL4Q96EI5 215 aa19.68■□□□□ 0.74
ATG4B-221ENST00000483778 MCRS1Q96EZ8 462 aa19.68■□□□□ 0.74
ATG4B-221ENST00000483778 SUSD3Q96L08 255 aa19.68■□□□□ 0.74
ATG4B-221ENST00000483778 TBC1D32Q96NH3 1257 aa19.68■□□□□ 0.74
ATG4B-221ENST00000483778 REEP2Q9BRK0 252 aa19.68■□□□□ 0.74
ATG4B-221ENST00000483778 FBXL5Q9UKA1 691 aa19.68■□□□□ 0.74
ATG4B-221ENST00000483778 SMC3Q9UQE7 1217 aa19.68■□□□□ 0.74
ATG4B-221ENST00000483778 ZFP37Q9Y6Q3 630 aaPredicted RBP19.68■□□□□ 0.74
ATG4B-221ENST00000483778 ARHGEF37A1IGU5 675 aa19.67■□□□□ 0.74
ATG4B-221ENST00000483778 PRR23AA6NEV1 266 aa19.67■□□□□ 0.74
ATG4B-221ENST00000483778 RHOP08100 348 aa19.67■□□□□ 0.74
ATG4B-221ENST00000483778 POU2F2P09086 479 aa19.67■□□□□ 0.74
ATG4B-221ENST00000483778 SMTNP53814 917 aa19.67■□□□□ 0.74
ATG4B-221ENST00000483778 NCKAP1LP55160 1127 aa19.67■□□□□ 0.74
ATG4B-221ENST00000483778 SNW1Q13573 536 aaKnown RBP19.67■□□□□ 0.74
ATG4B-221ENST00000483778 ZBTB6Q15916 424 aa19.67■□□□□ 0.74
ATG4B-221ENST00000483778 ZPBP2Q6X784 338 aa19.67■□□□□ 0.74
ATG4B-221ENST00000483778 CDK5RAP3Q96JB5 506 aa19.67■□□□□ 0.74
ATG4B-221ENST00000483778 ARHGEF3Q9NR81 526 aa19.67■□□□□ 0.74
ATG4B-221ENST00000483778 MTF2Q9Y483 593 aaPredicted RBP19.67■□□□□ 0.74
ATG4B-221ENST00000483778 NUB1Q9Y5A7 615 aa19.67■□□□□ 0.74
ATG4B-221ENST00000483778 TTC26A0AVF1 554 aa19.66■□□□□ 0.74
ATG4B-221ENST00000483778 LACTBL1A8MY62 500 aa19.66■□□□□ 0.74
ATG4B-221ENST00000483778 CLDN3O15551 220 aa19.66■□□□□ 0.74
ATG4B-221ENST00000483778 FAM189A1O60320 539 aa19.66■□□□□ 0.74
ATG4B-221ENST00000483778 CEBPBP17676 345 aa19.66■□□□□ 0.74
ATG4B-221ENST00000483778 KARSQ15046 597 aaKnown RBP19.66■□□□□ 0.74
ATG4B-221ENST00000483778 PHLDB3Q6NSJ2 640 aa19.66■□□□□ 0.74
ATG4B-221ENST00000483778 SLC39A4Q6P5W5 647 aa19.66■□□□□ 0.74
ATG4B-221ENST00000483778 USP49Q70CQ1 688 aa19.66■□□□□ 0.74
ATG4B-221ENST00000483778 GPBP1Q86WP2 473 aa19.66■□□□□ 0.74
ATG4B-221ENST00000483778 DDX12PQ92771 950 aa19.66■□□□□ 0.74
ATG4B-221ENST00000483778 IKZF4Q9H2S9 585 aa19.66■□□□□ 0.74
ATG4B-221ENST00000483778 DAXXQ9UER7 740 aaPredicted RBP19.66■□□□□ 0.74
ATG4B-221ENST00000483778 TIMM13Q9Y5L4 95 aaPredicted RBP19.66■□□□□ 0.74
ATG4B-221ENST00000483778 EP300Q09472 2414 aaPredicted RBP19.66■□□□□ 0.74
ATG4B-221ENST00000483778 PPEF2O14830 753 aa19.65■□□□□ 0.74
ATG4B-221ENST00000483778 SYN3O14994 580 aa19.65■□□□□ 0.74
ATG4B-221ENST00000483778 VNN2O95498 520 aa19.65■□□□□ 0.74
ATG4B-221ENST00000483778 ATF2P15336 505 aa19.65■□□□□ 0.74
ATG4B-221ENST00000483778 PLCG1P19174 1290 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms