RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 NOD1Q9Y239 953 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 NUB1Q9Y5A7 615 aa10.89□□□□□ -0.67
HDAC6-226ENST00000483656 GPR182O15218 404 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 EVI5O60447 810 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 MGEA5O60502 916 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 RECQL4O94761 1208 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 LCA5LO95447 670 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 SGPL1O95470 568 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 ASS1P00966 412 aaKnown RBP10.88□□□□□ -0.67
HDAC6-226ENST00000483656 TNNC2P02585 160 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 GHRP10912 638 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 FERP16591 822 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 ACO1P21399 889 aaKnown RBP10.88□□□□□ -0.67
HDAC6-226ENST00000483656 AKAP5P24588 427 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 GUCY2FP51841 1108 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 PTK2Q05397 1052 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 KLHL30Q0D2K2 578 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 ZBTB6Q15916 424 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 XKR4Q5GH76 650 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 APBB1IPQ7Z5R6 666 aaPredicted RBP10.88□□□□□ -0.67
HDAC6-226ENST00000483656 CD302Q8IX05 232 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 FAM71AQ8IYT1 594 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 PPM1KQ8N3J5 372 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 UBR7Q8N806 425 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 SHC3Q92529 594 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 ANKRD36BP1Q96IX9 119 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 ARID3AQ99856 593 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 SEZ6LQ9BYH1 1024 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 XYLT2Q9H1B5 865 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 HAUS4Q9H6D7 363 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 PLEKHA5Q9HAU0 1116 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 CHST12Q9NRB3 414 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 IPPQ9Y573 584 aa10.88□□□□□ -0.67
HDAC6-226ENST00000483656 PHACTR2O75167 634 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 ABL1P00519 1130 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 TMEM191BP0C7N4 346 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 CLCN1P35523 988 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 CYLC1P35663 651 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-226ENST00000483656 ARHGAP25P42331 645 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 KIF11P52732 1056 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 MFAP3P55082 362 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 NOP14P78316 857 aaKnown RBP10.87□□□□□ -0.67
HDAC6-226ENST00000483656 CYP27A1Q02318 531 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 GCNT1Q02742 428 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 NFX1Q12986 1120 aaKnown RBP10.87□□□□□ -0.67
HDAC6-226ENST00000483656 GPNMBQ14956 572 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 TMEM132DQ14C87 1099 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 WDR44Q5JSH3 913 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 NYAP1Q6ZVC0 841 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 MRPL10Q7Z7H8 261 aaKnown RBP10.87□□□□□ -0.67
HDAC6-226ENST00000483656 U2AF1L4Q8WU68 220 aaKnown RBP10.87□□□□□ -0.67
HDAC6-226ENST00000483656 KIF12Q96FN5 646 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 CCDC42Q96M95 316 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 APOL6Q9BWW8 343 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 RNF19AQ9NV58 838 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 KLK14Q9P0G3 267 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 CNTN3Q9P232 1028 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 NENFQ9UMX5 172 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 TFR2Q9UP52 801 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 DERAQ9Y315 318 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 C2CD2Q9Y426 696 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 PCDHB2Q9Y5E7 798 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 SQORQ9Y6N5 450 aa10.87□□□□□ -0.67
HDAC6-226ENST00000483656 A0A087X0T9 212 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 RCCD1A6NED2 376 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 MEIS3P2A8K0S8 358 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 DDX3XO00571 662 aaKnown RBP eCLIP10.86□□□□□ -0.67
HDAC6-226ENST00000483656 ZSCAN12O43309 604 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 TFRCP02786 760 aaKnown RBP10.86□□□□□ -0.67
HDAC6-226ENST00000483656 ITGB3P05106 788 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 CCDC175P0C221 793 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 FAM228BP0C875 321 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 COL6A1P12109 1028 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 KCNE1P15382 129 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 CHRNB2P17787 502 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 GFPT1Q06210 699 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-226ENST00000483656 PAK2Q13177 524 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 CUL2Q13617 745 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 SGSM1Q2NKQ1 1148 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 TDRD12Q587J7 1177 aaKnown RBP10.86□□□□□ -0.67
HDAC6-226ENST00000483656 TWF2Q6IBS0 349 aaKnown RBP10.86□□□□□ -0.67
HDAC6-226ENST00000483656 SLC39A5Q6ZMH5 540 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 ENOSF1Q7L5Y1 443 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 RTN4RL1Q86UN2 441 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-226ENST00000483656 NT5DC4Q86YG4 428 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 SLC30A5Q8TAD4 765 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 LNX1Q8TBB1 728 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-226ENST00000483656 DIS3LQ8TF46 1054 aaKnown RBP10.86□□□□□ -0.67
HDAC6-226ENST00000483656 C18orf25Q96B23 403 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-226ENST00000483656 TRAIPQ9BWF2 469 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 TRIM6Q9C030 488 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-226ENST00000483656 ACP6Q9NPH0 428 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 C1orf112Q9NSG2 853 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 FAM105AQ9NUU6 356 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 DPP3Q9NY33 737 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 PARP2Q9UGN5 583 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 BZW2Q9Y6E2 419 aaKnown RBP10.86□□□□□ -0.67
HDAC6-226ENST00000483656 RALGAPA2Q2PPJ7 1873 aa10.86□□□□□ -0.67
HDAC6-226ENST00000483656 SMIM28A0A1B0GU29 152 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 PTGESO14684 152 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms