RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 CITO14578 2027 aa18.13■□□□□ 0.49
RAB11FIP3-209ENST00000483002 MYH11P35749 1972 aa18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 NPHP3-ACAD11A0A0J9YXS1 232 aa18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 PRR23AA6NEV1 266 aa18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 MEFVO15553 781 aaPredicted RBP18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 TOM1L1O75674 476 aa18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 DCNP07585 359 aaKnown RBP18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 PLA2G4BP0C869 781 aa18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 ELF1P32519 619 aa18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 RPL9P32969 192 aaKnown RBP18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 MATR3P43243 847 aaKnown RBP eCLIP18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 SLC12A3P55017 1021 aa18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 ROR1Q01973 937 aa18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 CACNB1Q02641 598 aaPredicted RBP18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 PHLDB3Q6NSJ2 640 aa18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 MTSS1LQ765P7 747 aa18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 RTL10Q7L3V2 364 aa18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 TMEM161BQ8NDZ6 487 aa18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 ING5Q8WYH8 240 aa18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 CNTN3Q9P232 1028 aa18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 MRPS23Q9Y3D9 190 aaKnown RBP18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 SIT1Q9Y3P8 196 aa18.12■□□□□ 0.49
RAB11FIP3-209ENST00000483002 NOTCH4Q99466 2003 aa18.11■□□□□ 0.49
RAB11FIP3-209ENST00000483002 PRRG1O14668 218 aa18.11■□□□□ 0.49
RAB11FIP3-209ENST00000483002 CLDN3O15551 220 aa18.11■□□□□ 0.49
RAB11FIP3-209ENST00000483002 CD2BP2O95400 341 aaKnown RBP18.11■□□□□ 0.49
RAB11FIP3-209ENST00000483002 POU2F2P09086 479 aa18.11■□□□□ 0.49
RAB11FIP3-209ENST00000483002 MAPTP10636 758 aaKnown RBP18.11■□□□□ 0.49
RAB11FIP3-209ENST00000483002 SNW1Q13573 536 aaKnown RBP18.11■□□□□ 0.49
RAB11FIP3-209ENST00000483002 NOLC1Q14978 699 aaKnown RBP eCLIP18.11■□□□□ 0.49
RAB11FIP3-209ENST00000483002 SLC10A6Q3KNW5 377 aa18.11■□□□□ 0.49
RAB11FIP3-209ENST00000483002 ARL6IP4Q66PJ3 421 aaKnown RBP18.11■□□□□ 0.49
RAB11FIP3-209ENST00000483002 SLC8B1Q6J4K2 584 aa18.11■□□□□ 0.49
RAB11FIP3-209ENST00000483002 KCTD17Q8N5Z5 321 aa18.11■□□□□ 0.49
RAB11FIP3-209ENST00000483002 KXD1Q9BQD3 176 aa18.11■□□□□ 0.49
RAB11FIP3-209ENST00000483002 KCNH3Q9ULD8 1083 aa18.11■□□□□ 0.49
RAB11FIP3-209ENST00000483002 WDR27A2RRH5 827 aa18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 H7C4K7 107 aa18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 SYN3O14994 580 aa18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 ABLIM3O94929 683 aa18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 LRG1P02750 347 aa18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 RHOP08100 348 aa18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 PTPN2P17706 415 aa18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 MCM4P33991 863 aa18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 DHX8Q14562 1220 aaKnown RBP18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 ZPBP2Q6X784 338 aa18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 NPAS3Q8IXF0 933 aa18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 MCRS1Q96EZ8 462 aa18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 SHDQ96IW2 340 aa18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 FOXQ1Q9C009 403 aa18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 CYP4F11Q9HBI6 524 aa18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 KCND2Q9NZV8 630 aa18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 LARSQ9P2J5 1176 aaKnown RBP18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 SMC3Q9UQE7 1217 aa18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 MYH15Q9Y2K3 1946 aa18.1■□□□□ 0.49
RAB11FIP3-209ENST00000483002 CACNA1IQ9P0X4 2223 aa18.09■□□□□ 0.49
RAB11FIP3-209ENST00000483002 TBC1D4O60343 1298 aa18.09■□□□□ 0.49
RAB11FIP3-209ENST00000483002 ATF2P15336 505 aa18.09■□□□□ 0.49
RAB11FIP3-209ENST00000483002 SPAG1Q07617 926 aa18.09■□□□□ 0.49
RAB11FIP3-209ENST00000483002 CTXN3Q4LDR2 81 aa18.09■□□□□ 0.49
RAB11FIP3-209ENST00000483002 TMEM119Q4V9L6 283 aa18.09■□□□□ 0.49
RAB11FIP3-209ENST00000483002 ARSHQ5FYA8 562 aa18.09■□□□□ 0.49
RAB11FIP3-209ENST00000483002 LARP1BQ659C4 914 aaKnown RBP18.09■□□□□ 0.49
RAB11FIP3-209ENST00000483002 BICD1Q96G01 975 aa18.09■□□□□ 0.49
RAB11FIP3-209ENST00000483002 TBC1D32Q96NH3 1257 aa18.09■□□□□ 0.49
RAB11FIP3-209ENST00000483002 FBXL5Q9UKA1 691 aa18.09■□□□□ 0.49
RAB11FIP3-209ENST00000483002 CFAP54Q96N23 3096 aa18.08■□□□□ 0.49
RAB11FIP3-209ENST00000483002 ARHGEF37A1IGU5 675 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 SEC24AO95486 1093 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 CXCL8P10145 99 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 MARCKSP29966 332 aaPredicted RBP18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 UBA7P41226 1012 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 STARD6P59095 220 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 MCL1Q07820 350 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 MRPL58Q14197 206 aaKnown RBP18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 SLC5A9Q2M3M2 681 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 SLC44A4Q53GD3 710 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 HAUS6Q7Z4H7 955 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 TCEAL8Q8IYN2 117 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 TMEM130Q8N3G9 435 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 APPL2Q8NEU8 664 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 CALML4Q96GE6 196 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 SUSD3Q96L08 255 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 CORO1BQ9BR76 489 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 HAPLN2Q9GZV7 340 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 UPF2Q9HAU5 1272 aaKnown RBP18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 TUBGCP4Q9UGJ1 667 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 MYO15AQ9UKN7 3530 aa18.08■□□□□ 0.48
RAB11FIP3-209ENST00000483002 EP300Q09472 2414 aaPredicted RBP18.07■□□□□ 0.48
RAB11FIP3-209ENST00000483002 H0YCG3 227 aa18.07■□□□□ 0.48
RAB11FIP3-209ENST00000483002 LRRN2O75325 713 aa18.07■□□□□ 0.48
RAB11FIP3-209ENST00000483002 CLTAP09496 248 aa18.07■□□□□ 0.48
RAB11FIP3-209ENST00000483002 ZNF280DQ6N043 979 aa18.07■□□□□ 0.48
RAB11FIP3-209ENST00000483002 GPBP1Q86WP2 473 aa18.07■□□□□ 0.48
RAB11FIP3-209ENST00000483002 MYCT1Q8N699 235 aa18.07■□□□□ 0.48
RAB11FIP3-209ENST00000483002 PJA1Q8NG27 643 aa18.07■□□□□ 0.48
RAB11FIP3-209ENST00000483002 DDX12PQ92771 950 aa18.07■□□□□ 0.48
RAB11FIP3-209ENST00000483002 KIF12Q96FN5 646 aa18.07■□□□□ 0.48
RAB11FIP3-209ENST00000483002 AK8Q96MA6 479 aa18.07■□□□□ 0.48
RAB11FIP3-209ENST00000483002 REEP2Q9BRK0 252 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms