RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 RBSNQ9H1K0 784 aa12.53□□□□□ -0.4
HPS4-212ENST00000481910 CNTN3Q9P232 1028 aa12.53□□□□□ -0.4
HPS4-212ENST00000481910 DGKIO75912 1065 aa12.52□□□□□ -0.4
HPS4-212ENST00000481910 IPO7O95373 1038 aaKnown RBP12.52□□□□□ -0.4
HPS4-212ENST00000481910 POMCP01189 267 aa12.52□□□□□ -0.4
HPS4-212ENST00000481910 ATP2A2P16615 1042 aaKnown RBP12.52□□□□□ -0.4
HPS4-212ENST00000481910 ZNF18P17022 549 aa12.52□□□□□ -0.4
HPS4-212ENST00000481910 EEF1GP26641 437 aaKnown RBP12.52□□□□□ -0.4
HPS4-212ENST00000481910 GATMP50440 423 aa12.52□□□□□ -0.4
HPS4-212ENST00000481910 SCNN1GP51170 649 aa12.52□□□□□ -0.4
HPS4-212ENST00000481910 ZC3H12AQ5D1E8 599 aaKnown RBP12.52□□□□□ -0.4
HPS4-212ENST00000481910 XKR4Q5GH76 650 aa12.52□□□□□ -0.4
HPS4-212ENST00000481910 LMBRD2Q68DH5 695 aaPredicted RBP12.52□□□□□ -0.4
HPS4-212ENST00000481910 EP400NLQ6ZTU2 488 aa12.52□□□□□ -0.4
HPS4-212ENST00000481910 TRIM59Q8IWR1 403 aa12.52□□□□□ -0.4
HPS4-212ENST00000481910 ANKRD20A12PQ8NF67 263 aa12.52□□□□□ -0.4
HPS4-212ENST00000481910 PLEKHO2Q8TD55 490 aa12.52□□□□□ -0.4
HPS4-212ENST00000481910 SNRNP27Q8WVK2 155 aaKnown RBP12.52□□□□□ -0.4
HPS4-212ENST00000481910 KIF12Q96FN5 646 aa12.52□□□□□ -0.4
HPS4-212ENST00000481910 ZMAT2Q96NC0 199 aaKnown RBP12.52□□□□□ -0.4
HPS4-212ENST00000481910 SLC9A7Q96T83 725 aa12.52□□□□□ -0.4
HPS4-212ENST00000481910 ZBED2Q9BTP6 218 aa12.52□□□□□ -0.4
HPS4-212ENST00000481910 MIOSQ9NXC5 875 aa12.52□□□□□ -0.4
HPS4-212ENST00000481910 KANSL3Q9P2N6 904 aa12.52□□□□□ -0.4
HPS4-212ENST00000481910 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.52□□□□□ -0.4
HPS4-212ENST00000481910 LRRIQ3A6PVS8 624 aaPredicted RBP12.52□□□□□ -0.41
HPS4-212ENST00000481910 PTGESO14684 152 aa12.52□□□□□ -0.41
HPS4-212ENST00000481910 THP07101 528 aa12.52□□□□□ -0.41
HPS4-212ENST00000481910 NFICP08651 508 aa12.52□□□□□ -0.41
HPS4-212ENST00000481910 TRIM49P0CI25 452 aa12.52□□□□□ -0.41
HPS4-212ENST00000481910 TRIM49CP0CI26 452 aa12.52□□□□□ -0.41
HPS4-212ENST00000481910 ATP1A3P13637 1013 aa12.52□□□□□ -0.41
HPS4-212ENST00000481910 TNNT3P45378 269 aaPredicted RBP12.52□□□□□ -0.41
HPS4-212ENST00000481910 TFAMQ00059 246 aaKnown RBP12.52□□□□□ -0.41
HPS4-212ENST00000481910 TMEM132DQ14C87 1099 aa12.52□□□□□ -0.41
HPS4-212ENST00000481910 NOMO2Q5JPE7 1267 aa12.52□□□□□ -0.41
HPS4-212ENST00000481910 RASIP1Q5U651 963 aa12.52□□□□□ -0.41
HPS4-212ENST00000481910 WDR49Q8IV35 697 aa12.52□□□□□ -0.41
HPS4-212ENST00000481910 PHOSPHO2Q8TCD6 241 aa12.52□□□□□ -0.41
HPS4-212ENST00000481910 URGCPQ8TCY9 931 aa12.52□□□□□ -0.41
HPS4-212ENST00000481910 CASD1Q96PB1 797 aa12.52□□□□□ -0.41
HPS4-212ENST00000481910 TUBGCP2Q9BSJ2 902 aa12.52□□□□□ -0.41
HPS4-212ENST00000481910 TMEM117Q9H0C3 514 aa12.52□□□□□ -0.41
HPS4-212ENST00000481910 MMRN2Q9H8L6 949 aa12.52□□□□□ -0.41
HPS4-212ENST00000481910 TDRD15B5MCY1 1934 aaKnown RBP12.52□□□□□ -0.41
HPS4-212ENST00000481910 TBKBP1A7MCY6 615 aa12.51□□□□□ -0.41
HPS4-212ENST00000481910 GJB5O95377 273 aa12.51□□□□□ -0.41
HPS4-212ENST00000481910 KCNE1P15382 129 aa12.51□□□□□ -0.41
HPS4-212ENST00000481910 CLDN10P78369 228 aa12.51□□□□□ -0.41
HPS4-212ENST00000481910 RNASELQ05823 741 aaKnown RBP12.51□□□□□ -0.41
HPS4-212ENST00000481910 ENPEPQ07075 957 aa12.51□□□□□ -0.41
HPS4-212ENST00000481910 PAN2Q504Q3 1202 aaKnown RBP12.51□□□□□ -0.41
HPS4-212ENST00000481910 NT5DC4Q86YG4 428 aa12.51□□□□□ -0.41
HPS4-212ENST00000481910 EFCAB13Q8IY85 973 aa12.51□□□□□ -0.41
HPS4-212ENST00000481910 CACTINQ8WUQ7 758 aaKnown RBP12.51□□□□□ -0.41
HPS4-212ENST00000481910 SLC35C1Q96A29 364 aa12.51□□□□□ -0.41
HPS4-212ENST00000481910 YME1L1Q96TA2 773 aa12.51□□□□□ -0.41
HPS4-212ENST00000481910 CGRRF1Q99675 332 aa12.51□□□□□ -0.41
HPS4-212ENST00000481910 INTS13Q9NVM9 706 aa12.51□□□□□ -0.41
HPS4-212ENST00000481910 PLAGL2Q9UPG8 496 aa12.51□□□□□ -0.41
HPS4-212ENST00000481910 DERAQ9Y315 318 aa12.51□□□□□ -0.41
HPS4-212ENST00000481910 C2CD2Q9Y426 696 aa12.51□□□□□ -0.41
HPS4-212ENST00000481910 PTPRSQ13332 1948 aa12.51□□□□□ -0.41
HPS4-212ENST00000481910 RALGAPA2Q2PPJ7 1873 aa12.51□□□□□ -0.41
HPS4-212ENST00000481910 FNDC1Q4ZHG4 1894 aaPredicted RBP12.51□□□□□ -0.41
HPS4-212ENST00000481910 PES1O00541 588 aaKnown RBP12.5□□□□□ -0.41
HPS4-212ENST00000481910 INPPL1O15357 1258 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 STX10O60499 249 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 TMEM191BP0C7N4 346 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 BMP8BP34820 402 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 MCCD1P59942 119 aaPredicted RBP12.5□□□□□ -0.41
HPS4-212ENST00000481910 KCNH2Q12809 1159 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 GRIK3Q13003 919 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 KRT31Q15323 416 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 ZBTB6Q15916 424 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 DUOXA2Q1HG44 320 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 HERC6Q8IVU3 1022 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 OR5B17Q8NGF7 314 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 RSPH1Q8WYR4 309 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 ZNF516Q92618 1163 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 ZNF689Q96CS4 500 aaPredicted RBP12.5□□□□□ -0.41
HPS4-212ENST00000481910 ANKRD36BP1Q96IX9 119 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 FAM84AQ96KN4 292 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 PPP1R10Q96QC0 940 aaKnown RBP12.5□□□□□ -0.41
HPS4-212ENST00000481910 MRPL9Q9BYD2 267 aaKnown RBP12.5□□□□□ -0.41
HPS4-212ENST00000481910 SUDS3Q9H7L9 328 aaPredicted RBP12.5□□□□□ -0.41
HPS4-212ENST00000481910 SLC38A7Q9NVC3 462 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 TBC1D13Q9NVG8 400 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 UBQLN1Q9UMX0 589 aaKnown RBP12.5□□□□□ -0.41
HPS4-212ENST00000481910 PTPRJQ12913 1337 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 GOLGA6CA6NDK9 693 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 GOLGA6BA6NDN3 693 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 LRRC10BA6NIK2 292 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 XPOTO43592 962 aaKnown RBP12.5□□□□□ -0.41
HPS4-212ENST00000481910 TNNC2P02585 160 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 GOLGA6DP0CG33 693 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 GCLMP48507 274 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 AP3M2P53677 418 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 PPP3CAQ08209 521 aa12.5□□□□□ -0.41
HPS4-212ENST00000481910 PDCD11Q14690 1871 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms