RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 C19orf48Q6RUI8 117 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 KBTBD6Q86V97 674 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 CDR2LQ86X02 465 aaPredicted RBP10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 SPEM1Q8N4L4 309 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 GSTCDQ8NEC7 633 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 TNFRSF25Q93038 417 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 COLEC11Q9BWP8 271 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 TRIM6Q9C030 488 aaPredicted RBP10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 ANKEF1Q9NU02 776 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 ORC3Q9UBD5 711 aaPredicted RBP10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 MRPS23Q9Y3D9 190 aaKnown RBP10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 RALGAPA1Q6GYQ0 2036 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 COL4A2P08572 1712 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 A0A087WWV3 80 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 CYSRT1A8MQ03 144 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 WNT7AO00755 349 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 NPTXRO95502 500 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 CCNE1P24864 410 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 KRT2P35908 639 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 MPLP40238 635 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 PXNP49023 591 aaPredicted RBP10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 RARRES1P49788 294 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 CREMQ03060 361 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 CALCRLQ16602 461 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 WDR44Q5JSH3 913 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 PLA2G2CQ5R387 149 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 HACE1Q8IYU2 909 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 HASPINQ8TF76 798 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 ELSPBP1Q96BH3 223 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 KIF12Q96FN5 646 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 CCDC43Q96MW1 224 aaKnown RBP10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 CLSTN3Q9BQT9 956 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 EDEM2Q9BV94 578 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 NFKBIZQ9BYH8 718 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 POLR3FQ9H1D9 316 aaPredicted RBP10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 KLK14Q9P0G3 267 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 ADAM28Q9UKQ2 775 aa10.43□□□□□ -0.74
SMARCE1-210ENST00000481231 ZMYM2Q9UBW7 1377 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 A0A1B0GUA9 196 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 C4orf47A7E2U8 309 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 HYAL3O43820 417 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 USO1O60763 962 aaKnown RBP10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 FDPSP14324 419 aaKnown RBP10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 HOXA9P31269 272 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 RAP1GAPP47736 663 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 GRIK3Q13003 919 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 PTGDRQ13258 359 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 SLC27A1Q6PCB7 646 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 WDR5BQ86VZ2 330 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 GPR65Q8IYL9 337 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 NECAB1Q8N987 351 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 PIGOQ8TEQ8 1089 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 WASF1Q92558 559 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 PAAF1Q9BRP4 392 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 TRMT61BQ9BVS5 477 aaKnown RBP10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 TTC12Q9H892 705 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 BRMS1Q9HCU9 246 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 ZNF334Q9HCZ1 680 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 GPRC5CQ9NQ84 441 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 PARP2Q9UGN5 583 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 KCNH3Q9ULD8 1083 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 PCDHA12Q9UN75 941 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 GREB1Q4ZG55 1949 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 IGSF10Q6WRI0 2623 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 F5P12259 2224 aa10.42□□□□□ -0.74
SMARCE1-210ENST00000481231 MTCL1Q9Y4B5 1905 aaKnown RBP10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 NCANO14594 1321 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 SF3B1O75533 1304 aaKnown RBP eCLIP10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 LRRIQ4A6NIV6 560 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 NEMFO60524 1076 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 TADA2AO75478 443 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 PAPSS2O95340 614 aaPredicted RBP10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 RHOP08100 348 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 GDI1P31150 447 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 SOX9P48436 509 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 HSP90AA2PQ14568 343 aaPredicted RBP10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 PSMD5Q16401 504 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 FAM78AQ5JUQ0 283 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 AXDND1Q5T1B0 1012 aaPredicted RBP10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 PPP4R3CPQ6ZMV5 832 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 MAEAQ7L5Y9 396 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 PDZD3Q86UT5 571 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 CEP57Q86XR8 500 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 MAP4K3Q8IVH8 894 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 LOXL4Q96JB6 756 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 GDE1Q9NZC3 331 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 KLK13Q9UKR3 277 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 HELZ2Q9BYK8 2649 aaKnown RBP10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 SDK1Q7Z5N4 2213 aa10.41□□□□□ -0.74
SMARCE1-210ENST00000481231 BPTFQ12830 3046 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 CASTOR2A6NHX0 329 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 TTLL13PA6NNM8 815 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 BTBD18B2RXH4 712 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 PTGESO14684 152 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 RPP40O75818 363 aaKnown RBP10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 KIF4AO95239 1232 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 LARGE1O95461 756 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 SPATA31C1P0DKV0 1188 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 TXKP42681 527 aa10.4□□□□□ -0.74
SMARCE1-210ENST00000481231 FOSBP53539 338 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms