RNA–Protein interactions for RNA: ENST00000481038.5

GPCPD1-205, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 6,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-205ENST00000481038 NFIBO00712 420 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 SNPHO15079 494 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 RCAN1P53805 252 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 COX10Q12887 443 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 NFIXQ14938 502 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 EFTUD2Q15029 972 aaKnown RBP eCLIP4.78□□□□□ -1.642e-6■■■□□ 16.7
GPCPD1-205ENST00000481038 ZNF618Q5T7W0 954 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 LGSNQ5TDP6 509 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 BORAQ6PGQ7 559 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 LAYNQ6UX15 382 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 PLEKHM3Q6ZWE6 761 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 PEX26Q7Z412 305 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 MICALL2Q8IY33 904 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 ZFAND2BQ8WV99 257 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 DPF3Q92784 378 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 KRT12Q99456 494 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 IRF2BPLQ9H1B7 796 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 SERHL2Q9H4I8 314 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 TAF1DQ9H5J8 278 aaPredicted RBP4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 KIAA1586Q9HCI6 787 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 CHRAC1Q9NRG0 131 aa4.78□□□□□ -1.64
GPCPD1-205ENST00000481038 KLF18A0A0U1RQI7 1052 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 A0A1B0GVL5 298 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 CENPXA8MT69 81 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 NOS1APO75052 506 aaPredicted RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 TNNC2P02585 160 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 ZNF3P17036 446 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 ENDOUP21128 410 aaKnown RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 PGM1P36871 562 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 MAGOHP61326 146 aaKnown RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 TIMM10P62072 90 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 CCNA1P78396 465 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 ARHGAP4P98171 946 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 SNX17Q15036 470 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 CCNG2Q16589 344 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 PROSER3Q2NL68 480 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 DEPDC1Q5TB30 811 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 C9orf131Q5VYM1 1079 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 Q6ZUG5 572 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 DGLUCYQ7Z3D6 616 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 TMC2Q8TDI7 906 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 GTF3C2Q8WUA4 911 aaPredicted RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 MAGOHBQ96A72 148 aaKnown RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 CORO1BQ9BR76 489 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 EMILIN2Q9BXX0 1053 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 FANCFQ9NPI8 374 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 PKD2L2Q9NZM6 624 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 PDS5AQ29RF7 1337 aaKnown RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 PNMA6EA0A0J9YXQ4 647 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 hCG_1642624A0A1W2PR95 340 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 CCDC182A6NF36 153 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 USP27XA6NNY8 438 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 AP3D1O14617 1153 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 DDAH1O94760 285 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 TOP3BO95985 862 aaKnown RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 HSPA6P17066 643 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 IREB2P48200 963 aaKnown RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 ELF3P78545 371 aaPredicted RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 ILF2Q12905 390 aaKnown RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 EPC2Q52LR7 807 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 MTHFD1LQ6UB35 978 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 GMIPQ9P107 970 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 EFR3BQ9Y2G0 817 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 L3MBTL1Q9Y468 752 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 C1orf232A0A0U1RR37 186 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 CFAP69A5D8W1 941 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 C2orf74A8MZ97 194 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 H7C0C1 242 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 LGR5O75473 907 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 IFNA14P01570 189 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 CPA3P15088 417 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 MSR1P21757 451 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 RAB15P59190 212 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 EN1Q05925 392 aaPredicted RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 CUL4AQ13619 759 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 ITIH4Q14624 930 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 CCDC85BQ15834 202 aaPredicted RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 HP1BP3Q5SSJ5 553 aaPredicted RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 GALNT7Q86SF2 657 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 SPICE1Q8N0Z3 855 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 ADSSL1Q8N142 457 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 TBC1D19Q8N5T2 526 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 TBC1D5Q92609 795 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 TRIM15Q9C019 465 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 NT5C3AQ9H0P0 336 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 HPS4Q9NQG7 708 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 PCMTD2Q9NV79 361 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 FBXO28Q9NVF7 368 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 ANGEL1Q9UNK9 670 aaKnown RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 ZNF532Q9HCE3 1301 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 SMIM31A0A1B0GVY4 71 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 KRIT1O00522 736 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 APOL3O95236 402 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 DEXIO95424 95 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 CSF1RP07333 972 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 CASP14P31944 242 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 GTF2H1P32780 548 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 GDI2P50395 445 aaKnown RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 SNAP25P60880 206 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 ABATP80404 500 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms