RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 ZNF662Q6ZS27 426 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 H2AFVQ71UI9 128 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 TRIB2Q92519 343 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 SLC9A7Q96T83 725 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 TARS2Q9BW92 718 aaKnown RBP6.36□□□□□ -1.39
CPS1-207ENST00000479988 FAM107BQ9H098 131 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 CTTNBP2NLQ9P2B4 639 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 ZNF214Q9UL59 606 aaPredicted RBP6.36□□□□□ -1.39
CPS1-207ENST00000479988 PCDHA13Q9Y5I0 950 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 ZNF536O15090 1300 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 GOLGA6CA6NDK9 693 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 GOLGA6BA6NDN3 693 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 ATP2A1O14983 1001 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 GOLGA6DP0CG33 693 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 EIF4A3P38919 411 aaKnown RBP6.35□□□□□ -1.39
CPS1-207ENST00000479988 PBX1P40424 430 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 CLCN6P51797 869 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 NOMO2Q5JPE7 1267 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 CNKSR3Q6P9H4 555 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 FAM133AQ8N9E0 248 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 TRAPPC12Q8WVT3 735 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 MKNK1Q9BUB5 465 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 FAM204AQ9H8W3 233 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 GOLGA6AQ9NYA3 693 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 ABI2Q9NYB9 513 aaPredicted RBP6.35□□□□□ -1.39
CPS1-207ENST00000479988 RIPK3Q9Y572 518 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 SF3B1O75533 1304 aaKnown RBP eCLIP6.35□□□□□ -1.39
CPS1-207ENST00000479988 NFASCO94856 1347 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 E7EVH7 732 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 PI4K2BG5E9Z4 385 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 M0R2N6 131 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 POLR3GO15318 223 aaPredicted RBP6.35□□□□□ -1.39
CPS1-207ENST00000479988 SMPD1P17405 629 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 TAL1P17542 331 aaPredicted RBP6.35□□□□□ -1.39
CPS1-207ENST00000479988 NOVP48745 357 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 ITKQ08881 620 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 LAMTOR4Q0VGL1 99 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 GPM6BQ13491 265 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 GLE1Q53GS7 698 aaKnown RBP6.35□□□□□ -1.39
CPS1-207ENST00000479988 C8orf74Q6P047 294 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 GSTA5Q7RTV2 222 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 SUGP1Q8IWZ8 645 aaKnown RBP6.35□□□□□ -1.39
CPS1-207ENST00000479988 SYT2Q8N9I0 419 aaPredicted RBP6.35□□□□□ -1.39
CPS1-207ENST00000479988 SGSM3Q96HU1 749 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 SAMD11Q96NU1 681 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 TRPV6Q9H1D0 765 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 STAP1Q9ULZ2 295 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 HPCAL4Q9UM19 191 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 MYH14Q7Z406 1995 aaKnown RBP6.35□□□□□ -1.39
CPS1-207ENST00000479988 A0A1W2PQ45 241 aaPredicted RBP6.35□□□□□ -1.39
CPS1-207ENST00000479988 A0A1W2PQY0 241 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 SPATA31C2B4DYI2 1134 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 OGTO15294 1046 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 EIF3DO15371 548 aaKnown RBP eCLIP6.35□□□□□ -1.39
CPS1-207ENST00000479988 KLRC4O43908 158 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 COBLO75128 1261 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 IVLP07476 585 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 SNRPFP62306 86 aaKnown RBP6.35□□□□□ -1.39
CPS1-207ENST00000479988 WDR72Q3MJ13 1102 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 TRIM65Q6PJ69 517 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 SLC24A5Q71RS6 500 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 MAP7D3Q8IWC1 876 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 SAAL1Q96ER3 474 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 CAPZA3Q96KX2 299 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 PARD6BQ9BYG5 372 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 RNPEPQ9H4A4 650 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 POLD4Q9HCU8 107 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 TRPM5Q9NZQ8 1165 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 MRPS17Q9Y2R5 130 aaKnown RBP6.35□□□□□ -1.39
CPS1-207ENST00000479988 CCDC88AQ3V6T2 1871 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 CHD4Q14839 1912 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 ARAP2Q8WZ64 1704 aa6.35□□□□□ -1.39
CPS1-207ENST00000479988 SMIM35A0A1B0GVV1 85 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 PIK3CDO00329 1044 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 CAND2O75155 1236 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 TOM1L1O75674 476 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 CXCL14O95715 111 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 CHRM1P11229 460 aaPredicted RBP6.34□□□□□ -1.39
CPS1-207ENST00000479988 GLRA4Q5JXX5 417 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 HYIQ5T013 277 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 TDRD10Q5VZ19 366 aaKnown RBP6.34□□□□□ -1.39
CPS1-207ENST00000479988 MPZL3Q6UWV2 235 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 RBM23Q86U06 439 aaKnown RBP6.34□□□□□ -1.39
CPS1-207ENST00000479988 NPLOC4Q8TAT6 608 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 SCLYQ96I15 445 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 WDR24Q96S15 920 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 TXNRD2Q9NNW7 524 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 INTS13Q9NVM9 706 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 RASAL2Q9UJF2 1139 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 MRPS23Q9Y3D9 190 aaKnown RBP6.34□□□□□ -1.39
CPS1-207ENST00000479988 COL1A2P08123 1366 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 SLC37A4O43826 429 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 PEX10O60683 326 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 GLUD1P00367 558 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 CYP3A4P08684 503 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 APBA1Q02410 837 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 YWHAHQ04917 246 aaPredicted RBP6.34□□□□□ -1.39
CPS1-207ENST00000479988 GIT2Q14161 759 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 PTPN21Q16825 1174 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 LONRF2Q1L5Z9 754 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms