RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 FAM13AO94988 1023 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 KRT18P05783 430 aaKnown RBP18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 LAMP2P13473 410 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 NMT1P30419 496 aaKnown RBP18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 SMTNP53814 917 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 NCKAP1LP55160 1127 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 CUL4AQ13619 759 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 RAB33AQ14088 237 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 ASTLQ6HA08 431 aaPredicted RBP18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 PARM1Q6UWI2 310 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 GPR65Q8IYL9 337 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 SLC44A3Q8N4M1 653 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 RAD54LQ92698 747 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 ATOH1Q92858 354 aaPredicted RBP18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 FGF14Q92915 247 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 FAM212AQ96EL1 285 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 UROC1Q96N76 676 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 CLIC6Q96NY7 704 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 NTPCRQ9BSD7 190 aaKnown RBP18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 TIPINQ9BVW5 301 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 C17orf75Q9HAS0 396 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 EPS15L1Q9UBC2 864 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 DNMT3BQ9UBC3 853 aaKnown RBP18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 NUB1Q9Y5A7 615 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 TIMM13Q9Y5L4 95 aaPredicted RBP18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 MIA3Q5JRA6 1907 aa18.98■□□□□ 0.63
ECHDC1-216ENST00000479525 WDR27A2RRH5 827 aa18.98■□□□□ 0.63
ECHDC1-216ENST00000479525 CLDN3O15551 220 aa18.98■□□□□ 0.63
ECHDC1-216ENST00000479525 KCNE1P15382 129 aa18.98■□□□□ 0.63
ECHDC1-216ENST00000479525 MCM4P33991 863 aa18.98■□□□□ 0.63
ECHDC1-216ENST00000479525 ROR1Q01973 937 aa18.98■□□□□ 0.63
ECHDC1-216ENST00000479525 GPR152Q8TDT2 470 aa18.98■□□□□ 0.63
ECHDC1-216ENST00000479525 SCN1AP35498 2009 aa18.98■□□□□ 0.63
ECHDC1-216ENST00000479525 VPS13AQ96RL7 3174 aa18.97■□□□□ 0.63
ECHDC1-216ENST00000479525 TULP1O00294 542 aaPredicted RBP18.97■□□□□ 0.63
ECHDC1-216ENST00000479525 NRG2O14511 850 aaPredicted RBP18.97■□□□□ 0.63
ECHDC1-216ENST00000479525 PPEF2O14830 753 aa18.97■□□□□ 0.63
ECHDC1-216ENST00000479525 LIG4P49917 911 aa18.97■□□□□ 0.63
ECHDC1-216ENST00000479525 MCL1Q07820 350 aa18.97■□□□□ 0.63
ECHDC1-216ENST00000479525 RESTQ13127 1097 aa18.97■□□□□ 0.63
ECHDC1-216ENST00000479525 HTR4Q13639 388 aa18.97■□□□□ 0.63
ECHDC1-216ENST00000479525 ZC2HC1CQ53FD0 456 aaPredicted RBP18.97■□□□□ 0.63
ECHDC1-216ENST00000479525 SLC39A4Q6P5W5 647 aa18.97■□□□□ 0.63
ECHDC1-216ENST00000479525 POTEHQ6S545 545 aa18.97■□□□□ 0.63
ECHDC1-216ENST00000479525 DYMQ7RTS9 669 aa18.97■□□□□ 0.63
ECHDC1-216ENST00000479525 BRAPQ7Z569 592 aa18.97■□□□□ 0.63
ECHDC1-216ENST00000479525 KIF12Q96FN5 646 aa18.97■□□□□ 0.63
ECHDC1-216ENST00000479525 SLC38A7Q9NVC3 462 aa18.97■□□□□ 0.63
ECHDC1-216ENST00000479525 IGSF9Q9P2J2 1179 aa18.97■□□□□ 0.63
ECHDC1-216ENST00000479525 LACTBL1A8MY62 500 aa18.96■□□□□ 0.63
ECHDC1-216ENST00000479525 ANKRD63C9JTQ0 380 aa18.96■□□□□ 0.63
ECHDC1-216ENST00000479525 GALR2O43603 387 aaPredicted RBP18.96■□□□□ 0.63
ECHDC1-216ENST00000479525 SEC24AO95486 1093 aa18.96■□□□□ 0.63
ECHDC1-216ENST00000479525 OR4Q2P0C623 313 aa18.96■□□□□ 0.63
ECHDC1-216ENST00000479525 PTPAQ15257 358 aa18.96■□□□□ 0.63
ECHDC1-216ENST00000479525 SLC5A9Q2M3M2 681 aa18.96■□□□□ 0.63
ECHDC1-216ENST00000479525 CYP26C1Q6V0L0 522 aa18.96■□□□□ 0.63
ECHDC1-216ENST00000479525 ANKS3Q6ZW76 656 aa18.96■□□□□ 0.63
ECHDC1-216ENST00000479525 FGF13Q92913 245 aa18.96■□□□□ 0.63
ECHDC1-216ENST00000479525 AK8Q96MA6 479 aa18.96■□□□□ 0.63
ECHDC1-216ENST00000479525 KXD1Q9BQD3 176 aa18.96■□□□□ 0.63
ECHDC1-216ENST00000479525 RHOBTB2Q9BYZ6 727 aa18.96■□□□□ 0.63
ECHDC1-216ENST00000479525 LARSQ9P2J5 1176 aaKnown RBP18.96■□□□□ 0.63
ECHDC1-216ENST00000479525 TBX20Q9UMR3 447 aa18.96■□□□□ 0.63
ECHDC1-216ENST00000479525 HNRNPDLO14979 420 aaKnown RBP18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 TRAPPC3O43617 180 aa18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 PAPLNO95428 1278 aa18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 HNRNPA1P09651 372 aaKnown RBP eCLIP18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 SYT1P21579 422 aa18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 LONP1P36776 959 aaKnown RBP18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 ENOX2Q16206 610 aaKnown RBP18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 CTXN3Q4LDR2 81 aa18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 PDXDC1Q6P996 788 aa18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 ZPBP2Q6X784 338 aa18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 LARP4BQ92615 738 aaKnown RBP18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 MCRS1Q96EZ8 462 aa18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 FIZ1Q96SL8 496 aa18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 PANK2Q9BZ23 570 aa18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 PARVGQ9HBI0 331 aa18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 TBC1D7Q9P0N9 293 aa18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 FBXL5Q9UKA1 691 aa18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 ODF2LQ9ULJ1 636 aa18.95■□□□□ 0.62
ECHDC1-216ENST00000479525 PRRG1O14668 218 aa18.94■□□□□ 0.62
ECHDC1-216ENST00000479525 TRAK2O60296 914 aa18.94■□□□□ 0.62
ECHDC1-216ENST00000479525 XYLBO75191 536 aa18.94■□□□□ 0.62
ECHDC1-216ENST00000479525 CEBPBP17676 345 aa18.94■□□□□ 0.62
ECHDC1-216ENST00000479525 PABPC1LQ4VXU2 614 aaKnown RBP18.94■□□□□ 0.62
ECHDC1-216ENST00000479525 FOXD4L5Q5VV16 416 aaPredicted RBP18.94■□□□□ 0.62
ECHDC1-216ENST00000479525 FOXD4L4Q8WXT5 416 aaPredicted RBP18.94■□□□□ 0.62
ECHDC1-216ENST00000479525 DDX12PQ92771 950 aa18.94■□□□□ 0.62
ECHDC1-216ENST00000479525 TCEAL4Q96EI5 215 aa18.94■□□□□ 0.62
ECHDC1-216ENST00000479525 CYP4F11Q9HBI6 524 aa18.94■□□□□ 0.62
ECHDC1-216ENST00000479525 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.94■□□□□ 0.62
ECHDC1-216ENST00000479525 KCND2Q9NZV8 630 aa18.94■□□□□ 0.62
ECHDC1-216ENST00000479525 FBXO2Q9UK22 296 aaPredicted RBP18.94■□□□□ 0.62
ECHDC1-216ENST00000479525 CDH7Q9ULB5 785 aa18.94■□□□□ 0.62
ECHDC1-216ENST00000479525 BACE2Q9Y5Z0 518 aa18.94■□□□□ 0.62
ECHDC1-216ENST00000479525 TTC26A0AVF1 554 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 ANHXE9PGG2 379 aa18.93■□□□□ 0.62
ECHDC1-216ENST00000479525 FAM189A1O60320 539 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms