RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.47■□□□□ 0.87
SREBF1-212ENST00000478616 CMASQ8NFW8 434 aaPredicted RBP20.47■□□□□ 0.87
SREBF1-212ENST00000478616 BICD1Q96G01 975 aa20.47■□□□□ 0.87
SREBF1-212ENST00000478616 UROC1Q96N76 676 aa20.47■□□□□ 0.87
SREBF1-212ENST00000478616 SFXN1Q9H9B4 322 aa20.47■□□□□ 0.87
SREBF1-212ENST00000478616 OLFML3Q9NRN5 406 aa20.47■□□□□ 0.87
SREBF1-212ENST00000478616 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.47■□□□□ 0.87
SREBF1-212ENST00000478616 MTRRQ9UBK8 725 aa20.47■□□□□ 0.87
SREBF1-212ENST00000478616 GLUD1P00367 558 aa20.46■□□□□ 0.87
SREBF1-212ENST00000478616 C1RP00736 705 aa20.46■□□□□ 0.87
SREBF1-212ENST00000478616 SCP2P22307 547 aa20.46■□□□□ 0.87
SREBF1-212ENST00000478616 CASP1P29466 404 aa20.46■□□□□ 0.87
SREBF1-212ENST00000478616 TXLNAP40222 546 aa20.46■□□□□ 0.87
SREBF1-212ENST00000478616 RESP18Q5W5W9 173 aa20.46■□□□□ 0.87
SREBF1-212ENST00000478616 SCARA3Q6AZY7 606 aa20.46■□□□□ 0.87
SREBF1-212ENST00000478616 CEP57Q86XR8 500 aa20.46■□□□□ 0.87
SREBF1-212ENST00000478616 TRIM9Q9C026 710 aa20.46■□□□□ 0.87
SREBF1-212ENST00000478616 FBXW11Q9UKB1 542 aa20.46■□□□□ 0.87
SREBF1-212ENST00000478616 HSP90AA1P07900 732 aaKnown RBP20.45■□□□□ 0.86
SREBF1-212ENST00000478616 LRPAP1P30533 357 aa20.45■□□□□ 0.86
SREBF1-212ENST00000478616 MTHFRP42898 656 aa20.45■□□□□ 0.86
SREBF1-212ENST00000478616 EHHADHQ08426 723 aa20.45■□□□□ 0.86
SREBF1-212ENST00000478616 MRPL58Q14197 206 aaKnown RBP20.45■□□□□ 0.86
SREBF1-212ENST00000478616 DHX58Q96C10 678 aa20.45■□□□□ 0.86
SREBF1-212ENST00000478616 MSTO1Q9BUK6 570 aa20.45■□□□□ 0.86
SREBF1-212ENST00000478616 RHOBTB2Q9BYZ6 727 aa20.45■□□□□ 0.86
SREBF1-212ENST00000478616 TNMDQ9H2S6 317 aa20.45■□□□□ 0.86
SREBF1-212ENST00000478616 PLEKHA5Q9HAU0 1116 aa20.45■□□□□ 0.86
SREBF1-212ENST00000478616 SLC38A7Q9NVC3 462 aa20.45■□□□□ 0.86
SREBF1-212ENST00000478616 SEL1LQ9UBV2 794 aa20.45■□□□□ 0.86
SREBF1-212ENST00000478616 NFICP08651 508 aa20.44■□□□□ 0.86
SREBF1-212ENST00000478616 PDIA4P13667 645 aaKnown RBP20.44■□□□□ 0.86
SREBF1-212ENST00000478616 GAP43P17677 238 aa20.44■□□□□ 0.86
SREBF1-212ENST00000478616 RPL9P32969 192 aaKnown RBP20.44■□□□□ 0.86
SREBF1-212ENST00000478616 ACOT2P49753 483 aa20.44■□□□□ 0.86
SREBF1-212ENST00000478616 L1TD1Q5T7N2 865 aaKnown RBP20.44■□□□□ 0.86
SREBF1-212ENST00000478616 CES5AQ6NT32 575 aa20.44■□□□□ 0.86
SREBF1-212ENST00000478616 CNNM4Q6P4Q7 775 aa20.44■□□□□ 0.86
SREBF1-212ENST00000478616 KREMEN2Q8NCW0 462 aa20.44■□□□□ 0.86
SREBF1-212ENST00000478616 HVCN1Q96D96 273 aa20.44■□□□□ 0.86
SREBF1-212ENST00000478616 NECTIN4Q96NY8 510 aa20.44■□□□□ 0.86
SREBF1-212ENST00000478616 C1QTNF1Q9BXJ1 281 aa20.44■□□□□ 0.86
SREBF1-212ENST00000478616 SMOC2Q9H3U7 446 aa20.44■□□□□ 0.86
SREBF1-212ENST00000478616 CCDC195A0A1B0GUA6 201 aa20.43■□□□□ 0.86
SREBF1-212ENST00000478616 PRPF6O94906 941 aaKnown RBP20.43■□□□□ 0.86
SREBF1-212ENST00000478616 IDEP14735 1019 aa20.43■□□□□ 0.86
SREBF1-212ENST00000478616 AARSP49588 968 aaKnown RBP eCLIP20.43■□□□□ 0.86
SREBF1-212ENST00000478616 ELAVL2Q12926 359 aaKnown RBP20.43■□□□□ 0.86
SREBF1-212ENST00000478616 RAB33AQ14088 237 aa20.43■□□□□ 0.86
SREBF1-212ENST00000478616 ATAT1Q5SQI0 421 aa20.43■□□□□ 0.86
SREBF1-212ENST00000478616 ATL3Q6DD88 541 aa20.43■□□□□ 0.86
SREBF1-212ENST00000478616 C15orf39Q6ZRI6 1047 aa20.43■□□□□ 0.86
SREBF1-212ENST00000478616 TMEM87AQ8NBN3 555 aa20.43■□□□□ 0.86
SREBF1-212ENST00000478616 KCNG4Q8TDN1 519 aa20.43■□□□□ 0.86
SREBF1-212ENST00000478616 HDAC7Q8WUI4 952 aa20.43■□□□□ 0.86
SREBF1-212ENST00000478616 FAM84AQ96KN4 292 aa20.43■□□□□ 0.86
SREBF1-212ENST00000478616 SUSD3Q96L08 255 aa20.43■□□□□ 0.86
SREBF1-212ENST00000478616 RIPOR3Q96MK2 946 aa20.43■□□□□ 0.86
SREBF1-212ENST00000478616 MRPL44Q9H9J2 332 aaKnown RBP20.43■□□□□ 0.86
SREBF1-212ENST00000478616 PANK4Q9NVE7 773 aa20.43■□□□□ 0.86
SREBF1-212ENST00000478616 BACE2Q9Y5Z0 518 aa20.43■□□□□ 0.86
SREBF1-212ENST00000478616 KMT2EQ8IZD2 1858 aa20.42■□□□□ 0.86
SREBF1-212ENST00000478616 SPTLC1O15269 473 aa20.42■□□□□ 0.86
SREBF1-212ENST00000478616 POLR2DO15514 142 aaKnown RBP20.42■□□□□ 0.86
SREBF1-212ENST00000478616 ZMYND10O75800 440 aa20.42■□□□□ 0.86
SREBF1-212ENST00000478616 ALADP13716 330 aa20.42■□□□□ 0.86
SREBF1-212ENST00000478616 CYP3A5P20815 502 aa20.42■□□□□ 0.86
SREBF1-212ENST00000478616 OR1D2P34982 312 aa20.42■□□□□ 0.86
SREBF1-212ENST00000478616 MATR3P43243 847 aaKnown RBP eCLIP20.42■□□□□ 0.86
SREBF1-212ENST00000478616 VARS2Q5ST30 1063 aaKnown RBP20.42■□□□□ 0.86
SREBF1-212ENST00000478616 SPATA1Q5VX52 437 aa20.42■□□□□ 0.86
SREBF1-212ENST00000478616 JADE1Q6IE81 842 aa20.42■□□□□ 0.86
SREBF1-212ENST00000478616 EPM2AIP1Q7L775 607 aaPredicted RBP20.42■□□□□ 0.86
SREBF1-212ENST00000478616 EFCAB13Q8IY85 973 aa20.42■□□□□ 0.86
SREBF1-212ENST00000478616 LEO1Q8WVC0 666 aaPredicted RBP20.42■□□□□ 0.86
SREBF1-212ENST00000478616 KIF12Q96FN5 646 aa20.42■□□□□ 0.86
SREBF1-212ENST00000478616 C7orf25Q9BPX7 421 aa20.42■□□□□ 0.86
SREBF1-212ENST00000478616 PLEKHA4Q9H4M7 779 aa20.42■□□□□ 0.86
SREBF1-212ENST00000478616 CDY1Q9Y6F8 540 aa20.42■□□□□ 0.86
SREBF1-212ENST00000478616 GCNT3O95395 438 aa20.41■□□□□ 0.86
SREBF1-212ENST00000478616 PPP2R3AQ06190 1150 aa20.41■□□□□ 0.86
SREBF1-212ENST00000478616 TMEM31Q5JXX7 168 aa20.41■□□□□ 0.86
SREBF1-212ENST00000478616 ADALQ6DHV7 355 aa20.41■□□□□ 0.86
SREBF1-212ENST00000478616 POTEHQ6S545 545 aa20.41■□□□□ 0.86
SREBF1-212ENST00000478616 GRAMD1CQ8IYS0 662 aa20.41■□□□□ 0.86
SREBF1-212ENST00000478616 EDAQ92838 391 aa20.41■□□□□ 0.86
SREBF1-212ENST00000478616 CBWD1Q9BRT8 395 aa20.41■□□□□ 0.86
SREBF1-212ENST00000478616 RPF1Q9H9Y2 349 aaKnown RBP20.41■□□□□ 0.86
SREBF1-212ENST00000478616 AGO2Q9UKV8 859 aaKnown RBP20.41■□□□□ 0.86
SREBF1-212ENST00000478616 UBQLN1Q9UMX0 589 aaKnown RBP20.41■□□□□ 0.86
SREBF1-212ENST00000478616 WDR27A2RRH5 827 aa20.4■□□□□ 0.86
SREBF1-212ENST00000478616 M0QZQ0 153 aa20.4■□□□□ 0.86
SREBF1-212ENST00000478616 ACTN4O43707 911 aaKnown RBP20.4■□□□□ 0.86
SREBF1-212ENST00000478616 VNN2O95498 520 aa20.4■□□□□ 0.86
SREBF1-212ENST00000478616 ZXDAP98168 799 aa20.4■□□□□ 0.86
SREBF1-212ENST00000478616 ROR1Q01973 937 aa20.4■□□□□ 0.86
SREBF1-212ENST00000478616 CREMQ03060 361 aa20.4■□□□□ 0.86
SREBF1-212ENST00000478616 SLC8B1Q6J4K2 584 aa20.4■□□□□ 0.86
SREBF1-212ENST00000478616 ZDHHC14Q8IZN3 488 aa20.4■□□□□ 0.86
SREBF1-212ENST00000478616 PRKD2Q9BZL6 878 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms