RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PHOX2BQ99453 314 aa15.78■□□□□ 0.12
SMARCE1-209ENST00000478349 OXCT2Q9BYC2 517 aaPredicted RBP15.78■□□□□ 0.12
SMARCE1-209ENST00000478349 GOLGA2P5Q9HBQ8 144 aa15.78■□□□□ 0.12
SMARCE1-209ENST00000478349 TBCAO75347 108 aaKnown RBP15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 KRT18P05783 430 aaKnown RBP15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 CLTAP09496 248 aa15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 MAPTP10636 758 aaKnown RBP15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 PDCP20941 246 aa15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 LIG4P49917 911 aa15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 PPP2R3AQ06190 1150 aa15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 MCL1Q07820 350 aa15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 RAD51AP2Q09MP3 1159 aa15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 IL17AQ16552 155 aa15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 VARS2Q5ST30 1063 aaKnown RBP15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 LARP1BQ659C4 914 aaKnown RBP15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 TPGS2Q68CL5 300 aa15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 TAS1R3Q7RTX0 852 aa15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 KCNK18Q7Z418 384 aa15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 DTWD2Q8NBA8 298 aa15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 GPR152Q8TDT2 470 aa15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 FGF13Q92913 245 aa15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 NKD2Q969F2 451 aaPredicted RBP15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 TBC1D17Q9HA65 648 aa15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 GDE1Q9NZC3 331 aa15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 CA14Q9ULX7 337 aa15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 MRPS23Q9Y3D9 190 aaKnown RBP15.77■□□□□ 0.12
SMARCE1-209ENST00000478349 ARHGEF37A1IGU5 675 aa15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 SFI1A8K8P3 1242 aa15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 ZNF197O14709 1029 aa15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 HNRNPDLO14979 420 aaKnown RBP15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 ADAM12O43184 909 aa15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 FAM13AO94988 1023 aa15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 NPR3P17342 541 aa15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 PAX3P23760 479 aa15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 MARCKSP29966 332 aaPredicted RBP15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 LONP1P36776 959 aaKnown RBP15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 BRCC3P46736 316 aa15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 SLC12A3P55017 1021 aa15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 ROR1Q01973 937 aa15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 SOX4Q06945 474 aaPredicted RBP15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 ANGPT1Q15389 498 aa15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 TMEM119Q4V9L6 283 aa15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 ZC3H14Q6PJT7 736 aaKnown RBP15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 C3orf58Q8NDZ4 430 aa15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 SUSD3Q96L08 255 aa15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 PNMA5Q96PV4 448 aa15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 CXCL16Q9H2A7 254 aa15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 PARVGQ9HBI0 331 aa15.76■□□□□ 0.11
SMARCE1-209ENST00000478349 K7ENM7 598 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 ABLIM1O14639 778 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 ATF2P15336 505 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 PTPN2P17706 415 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 NCKAP1LP55160 1127 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 PRKCQQ04759 706 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 CTXN3Q4LDR2 81 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 IQCEQ6IPM2 695 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 HAUS6Q7Z4H7 955 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 GPBP1Q86WP2 473 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 TCEAL8Q8IYN2 117 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 LEMD2Q8NC56 503 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 KCNN1Q92952 543 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 PLIN2Q99541 437 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 SEMA4AQ9H3S1 761 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 CYP4F11Q9HBI6 524 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 AVENQ9NQS1 362 aaPredicted RBP15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 UBQLN1Q9UMX0 589 aaKnown RBP15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 SIT1Q9Y3P8 196 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 PLXNA3P51805 1871 aa15.75■□□□□ 0.11
SMARCE1-209ENST00000478349 KRBA1A5PL33 1030 aa15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 I3L4J1 428 aa15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 ABLIM3O94929 683 aa15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 CPB1P15086 417 aa15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 CYP3A5P20815 502 aa15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 TXLNAP40222 546 aa15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 MAGEA9P43362 315 aa15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 ARPP19P56211 112 aa15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 NTHL1P78549 312 aa15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 PLD1Q13393 1074 aa15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 CYP4A22Q5TCH4 519 aa15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 RSPO2Q6UXX9 243 aaPredicted RBP15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 USP37Q86T82 979 aa15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 CD302Q8IX05 232 aa15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 NPAS3Q8IXF0 933 aa15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 MYCT1Q8N699 235 aa15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 KIF12Q96FN5 646 aa15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 ZMAT2Q96NC0 199 aaKnown RBP15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 PCDHB8Q9UN66 801 aa15.74■□□□□ 0.11
SMARCE1-209ENST00000478349 C2orf16Q68DN1 1984 aa15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 ECI2O75521 394 aa15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 MICAL2O94851 1124 aa15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 RHOP08100 348 aa15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 CXCL8P10145 99 aa15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 YWHAHQ04917 246 aaPredicted RBP15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 SLC10A6Q3KNW5 377 aa15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 PARM1Q6UWI2 310 aa15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 CD300LGQ6UXG3 332 aa15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 PDZD4Q76G19 769 aaPredicted RBP15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 ITFG1Q8TB96 612 aa15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 FGF14Q92915 247 aa15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 C18orf25Q96B23 403 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms