RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 GDI1P31150 447 aa22.33■■□□□ 1.17
PDLIM1-202ENST00000477757 CCR2P41597 374 aa22.33■■□□□ 1.17
PDLIM1-202ENST00000477757 CLCNKBP51801 687 aa22.33■■□□□ 1.17
PDLIM1-202ENST00000477757 DMWDQ09019 674 aa22.33■■□□□ 1.17
PDLIM1-202ENST00000477757 PRPF4BQ13523 1007 aaKnown RBP22.33■■□□□ 1.17
PDLIM1-202ENST00000477757 SKAP1Q86WV1 359 aa22.33■■□□□ 1.17
PDLIM1-202ENST00000477757 TCEAL8Q8IYN2 117 aa22.33■■□□□ 1.17
PDLIM1-202ENST00000477757 SPEM1Q8N4L4 309 aa22.33■■□□□ 1.17
PDLIM1-202ENST00000477757 OXER1Q8TDS5 423 aa22.33■■□□□ 1.17
PDLIM1-202ENST00000477757 PIGOQ8TEQ8 1089 aa22.33■■□□□ 1.17
PDLIM1-202ENST00000477757 ZNF274Q96GC6 653 aaPredicted RBP22.33■■□□□ 1.17
PDLIM1-202ENST00000477757 C2orf40Q9H1Z8 148 aa22.33■■□□□ 1.17
PDLIM1-202ENST00000477757 CHURC1-FNTBB4DL54 471 aa22.32■■□□□ 1.16
PDLIM1-202ENST00000477757 I3L4J1 428 aa22.32■■□□□ 1.16
PDLIM1-202ENST00000477757 KCNA4P22459 653 aa22.32■■□□□ 1.16
PDLIM1-202ENST00000477757 ELF1P32519 619 aa22.32■■□□□ 1.16
PDLIM1-202ENST00000477757 FNTBP49356 437 aa22.32■■□□□ 1.16
PDLIM1-202ENST00000477757 SHC2P98077 582 aa22.32■■□□□ 1.16
PDLIM1-202ENST00000477757 SRSF5Q13243 272 aaKnown RBP22.32■■□□□ 1.16
PDLIM1-202ENST00000477757 PTGDRQ13258 359 aa22.32■■□□□ 1.16
PDLIM1-202ENST00000477757 UPP1Q16831 310 aa22.32■■□□□ 1.16
PDLIM1-202ENST00000477757 TMEM132AQ24JP5 1023 aa22.32■■□□□ 1.16
PDLIM1-202ENST00000477757 GLRA4Q5JXX5 417 aa22.32■■□□□ 1.16
PDLIM1-202ENST00000477757 PDZD4Q76G19 769 aaPredicted RBP22.32■■□□□ 1.16
PDLIM1-202ENST00000477757 C3orf58Q8NDZ4 430 aa22.32■■□□□ 1.16
PDLIM1-202ENST00000477757 MCPH1Q8NEM0 835 aa22.32■■□□□ 1.16
PDLIM1-202ENST00000477757 GDAQ9Y2T3 454 aa22.32■■□□□ 1.16
PDLIM1-202ENST00000477757 INSL5Q9Y5Q6 135 aa22.32■■□□□ 1.16
PDLIM1-202ENST00000477757 ZZEF1O43149 2961 aa22.32■■□□□ 1.16
PDLIM1-202ENST00000477757 ARNTLO00327 626 aa22.31■■□□□ 1.16
PDLIM1-202ENST00000477757 PRKCBP05771 671 aa22.31■■□□□ 1.16
PDLIM1-202ENST00000477757 ATF2P15336 505 aa22.31■■□□□ 1.16
PDLIM1-202ENST00000477757 LIMK1P53667 647 aa22.31■■□□□ 1.16
PDLIM1-202ENST00000477757 MLLT6P55198 1093 aaPredicted RBP22.31■■□□□ 1.16
PDLIM1-202ENST00000477757 MAPK6Q16659 721 aa22.31■■□□□ 1.16
PDLIM1-202ENST00000477757 DCAF4L1Q3SXM0 396 aa22.31■■□□□ 1.16
PDLIM1-202ENST00000477757 EARS2Q5JPH6 523 aaKnown RBP22.31■■□□□ 1.16
PDLIM1-202ENST00000477757 EEF1DP3Q658K8 133 aa22.31■■□□□ 1.16
PDLIM1-202ENST00000477757 RUFY3Q7L099 469 aa22.31■■□□□ 1.16
PDLIM1-202ENST00000477757 LONP2Q86WA8 852 aa22.31■■□□□ 1.16
PDLIM1-202ENST00000477757 MSANTD3Q96H12 275 aa22.31■■□□□ 1.16
PDLIM1-202ENST00000477757 CCDC113Q9H0I3 377 aa22.31■■□□□ 1.16
PDLIM1-202ENST00000477757 TRPV4Q9HBA0 871 aa22.31■■□□□ 1.16
PDLIM1-202ENST00000477757 PCDHA12Q9UN75 941 aa22.31■■□□□ 1.16
PDLIM1-202ENST00000477757 NCANO14594 1321 aa22.31■■□□□ 1.16
PDLIM1-202ENST00000477757 K7ESF4 209 aa22.3■■□□□ 1.16
PDLIM1-202ENST00000477757 ACKR2O00590 384 aa22.3■■□□□ 1.16
PDLIM1-202ENST00000477757 EDN1P05305 212 aa22.3■■□□□ 1.16
PDLIM1-202ENST00000477757 XRCC6P12956 609 aaKnown RBP eCLIP22.3■■□□□ 1.16
PDLIM1-202ENST00000477757 LRRC32Q14392 662 aa22.3■■□□□ 1.16
PDLIM1-202ENST00000477757 IL31Q6EBC2 164 aa22.3■■□□□ 1.16
PDLIM1-202ENST00000477757 C1orf228Q6PIY5 440 aa22.3■■□□□ 1.16
PDLIM1-202ENST00000477757 MAEAQ7L5Y9 396 aa22.3■■□□□ 1.16
PDLIM1-202ENST00000477757 ZSWIM3Q96MP5 696 aa22.3■■□□□ 1.16
PDLIM1-202ENST00000477757 GOLGA2P5Q9HBQ8 144 aa22.3■■□□□ 1.16
PDLIM1-202ENST00000477757 DAXXQ9UER7 740 aaPredicted RBP22.3■■□□□ 1.16
PDLIM1-202ENST00000477757 RALGAPA1Q6GYQ0 2036 aa22.3■■□□□ 1.16
PDLIM1-202ENST00000477757 FAM205CA6NFA0 338 aa22.29■■□□□ 1.16
PDLIM1-202ENST00000477757 ZNF263O14978 683 aa22.29■■□□□ 1.16
PDLIM1-202ENST00000477757 SEC24AO95486 1093 aa22.29■■□□□ 1.16
PDLIM1-202ENST00000477757 XBP1P17861 261 aa22.29■■□□□ 1.16
PDLIM1-202ENST00000477757 CCNE1P24864 410 aa22.29■■□□□ 1.16
PDLIM1-202ENST00000477757 VIPR2P41587 438 aa22.29■■□□□ 1.16
PDLIM1-202ENST00000477757 BRCC3P46736 316 aa22.29■■□□□ 1.16
PDLIM1-202ENST00000477757 FAM160A2Q8N612 972 aaPredicted RBP22.29■■□□□ 1.16
PDLIM1-202ENST00000477757 BSNDQ8WZ55 320 aa22.29■■□□□ 1.16
PDLIM1-202ENST00000477757 CYP4F11Q9HBI6 524 aa22.29■■□□□ 1.16
PDLIM1-202ENST00000477757 ZSWIM6Q9HCJ5 1215 aa22.29■■□□□ 1.16
PDLIM1-202ENST00000477757 GJB4Q9NTQ9 266 aa22.29■■□□□ 1.16
PDLIM1-202ENST00000477757 USP20Q9Y2K6 914 aa22.29■■□□□ 1.16
PDLIM1-202ENST00000477757 STK36Q9NRP7 1315 aa22.29■■□□□ 1.16
PDLIM1-202ENST00000477757 MOSPD3O75425 235 aa22.28■■□□□ 1.16
PDLIM1-202ENST00000477757 CDKL5O76039 1030 aa22.28■■□□□ 1.16
PDLIM1-202ENST00000477757 STK3Q13188 491 aa22.28■■□□□ 1.16
PDLIM1-202ENST00000477757 CALCRLQ16602 461 aa22.28■■□□□ 1.16
PDLIM1-202ENST00000477757 N4BP2L1Q5TBK1 243 aaPredicted RBP22.28■■□□□ 1.16
PDLIM1-202ENST00000477757 CYP4A22Q5TCH4 519 aa22.28■■□□□ 1.16
PDLIM1-202ENST00000477757 MFSD6LQ8IWD5 586 aa22.28■■□□□ 1.16
PDLIM1-202ENST00000477757 LEMD2Q8NC56 503 aa22.28■■□□□ 1.16
PDLIM1-202ENST00000477757 ZSCAN18Q8TBC5 510 aaPredicted RBP22.28■■□□□ 1.16
PDLIM1-202ENST00000477757 TTC12Q9H892 705 aaPredicted RBP22.28■■□□□ 1.16
PDLIM1-202ENST00000477757 GREB1Q4ZG55 1949 aa22.27■■□□□ 1.16
PDLIM1-202ENST00000477757 A0A087WWV3 80 aa22.27■■□□□ 1.16
PDLIM1-202ENST00000477757 EPHA5P54756 1037 aa22.27■■□□□ 1.16
PDLIM1-202ENST00000477757 PDCD11Q14690 1871 aaKnown RBP22.27■■□□□ 1.16
PDLIM1-202ENST00000477757 AASDHQ4L235 1098 aaPredicted RBP22.27■■□□□ 1.16
PDLIM1-202ENST00000477757 TPGS2Q68CL5 300 aa22.27■■□□□ 1.16
PDLIM1-202ENST00000477757 Q6ZS52 159 aa22.27■■□□□ 1.16
PDLIM1-202ENST00000477757 ELMOD1Q8N336 334 aa22.27■■□□□ 1.16
PDLIM1-202ENST00000477757 LARP6Q9BRS8 491 aaKnown RBP22.27■■□□□ 1.16
PDLIM1-202ENST00000477757 RBM12Q9NTZ6 932 aaKnown RBP22.27■■□□□ 1.16
PDLIM1-202ENST00000477757 RALYQ9UKM9 306 aaKnown RBP22.27■■□□□ 1.16
PDLIM1-202ENST00000477757 SPEGQ15772 3267 aa22.26■■□□□ 1.15
PDLIM1-202ENST00000477757 TM4SF5O14894 197 aa22.26■■□□□ 1.15
PDLIM1-202ENST00000477757 SYN3O14994 580 aa22.26■■□□□ 1.15
PDLIM1-202ENST00000477757 ATP2B1P20020 1258 aa22.26■■□□□ 1.15
PDLIM1-202ENST00000477757 HOXA6P31267 233 aa22.26■■□□□ 1.15
PDLIM1-202ENST00000477757 NAMPTP43490 491 aa22.26■■□□□ 1.15
PDLIM1-202ENST00000477757 ARPP19P56211 112 aa22.26■■□□□ 1.15
PDLIM1-202ENST00000477757 SOX4Q06945 474 aaPredicted RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms