RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 PLS3P13797 630 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 RPL9P32969 192 aaKnown RBP12.43□□□□□ -0.42
HDLBP-236ENST00000477477 STARD6P59095 220 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 STRN3Q13033 797 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 NOLC1Q14978 699 aaKnown RBP eCLIP12.43□□□□□ -0.42
HDLBP-236ENST00000477477 RABEP1Q15276 862 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 ZRSR1Q15695 479 aaKnown RBP12.43□□□□□ -0.42
HDLBP-236ENST00000477477 SPECC1Q5M775 1068 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 SYT2Q8N9I0 419 aaPredicted RBP12.43□□□□□ -0.42
HDLBP-236ENST00000477477 TMEM161BQ8NDZ6 487 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 ZNF461Q8TAF7 563 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 ING5Q8WYH8 240 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 C18orf25Q96B23 403 aaPredicted RBP12.43□□□□□ -0.42
HDLBP-236ENST00000477477 SHDQ96IW2 340 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 ZBTB45Q96K62 511 aaPredicted RBP12.43□□□□□ -0.42
HDLBP-236ENST00000477477 FOXQ1Q9C009 403 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 AVENQ9NQS1 362 aaPredicted RBP12.43□□□□□ -0.42
HDLBP-236ENST00000477477 ANKFY1Q9P2R3 1169 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 KCNG1Q9UIX4 513 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 MRPS23Q9Y3D9 190 aaKnown RBP12.43□□□□□ -0.42
HDLBP-236ENST00000477477 NUB1Q9Y5A7 615 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 FAM186AA6NE01 2351 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 H7C4K7 107 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 ABLIM3O94929 683 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 LRG1P02750 347 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 MAPTP10636 758 aaKnown RBP12.42□□□□□ -0.42
HDLBP-236ENST00000477477 ATF2P15336 505 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 ELF1P32519 619 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 SMTNP53814 917 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 SLC12A3P55017 1021 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 PFKPQ01813 784 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 MCL1Q07820 350 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 RAD51AP2Q09MP3 1159 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 SNW1Q13573 536 aaKnown RBP12.42□□□□□ -0.42
HDLBP-236ENST00000477477 MRPL58Q14197 206 aaKnown RBP12.42□□□□□ -0.42
HDLBP-236ENST00000477477 MLF2Q15773 248 aaPredicted RBP12.42□□□□□ -0.42
HDLBP-236ENST00000477477 SLC5A9Q2M3M2 681 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 SLC10A6Q3KNW5 377 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 TMEM119Q4V9L6 283 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 ZPBP2Q6X784 338 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 ADSSL1Q8N142 457 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 TMX3Q96JJ7 454 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 SUSD3Q96L08 255 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 PLIN2Q99541 437 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 KXD1Q9BQD3 176 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 DDX23Q9BUQ8 820 aaKnown RBP12.42□□□□□ -0.42
HDLBP-236ENST00000477477 GDE1Q9NZC3 331 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 KCND2Q9NZV8 630 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 FBXL5Q9UKA1 691 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 GVINP1Q7Z2Y8 2422 aa12.42□□□□□ -0.42
HDLBP-236ENST00000477477 KANSL1LA0AUZ9 987 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 VWA3AA6NCI4 1184 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 PRRG1O14668 218 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 CLDN3O15551 220 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 LRRN2O75325 713 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 PLA2G4BP0C869 781 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 GLULP15104 373 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 CEBPBP17676 345 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 GJB2P29033 226 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 MCM4P33991 863 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 ARPP19P56211 112 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 PRKCQQ04759 706 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 CTXN3Q4LDR2 81 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 SEZ6Q53EL9 994 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 SLC44A4Q53GD3 710 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 ARL6IP4Q66PJ3 421 aaKnown RBP12.41□□□□□ -0.42
HDLBP-236ENST00000477477 TPGS2Q68CL5 300 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 ZNF280DQ6N043 979 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 C1orf210Q8IVY1 113 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 MCRS1Q96EZ8 462 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 DOCK6Q96HP0 2047 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 CDK5RAP3Q96JB5 506 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 TBC1D32Q96NH3 1257 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 SEMA4AQ9H3S1 761 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 CYP4F11Q9HBI6 524 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 TUBGCP4Q9UGJ1 667 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 INSL5Q9Y5Q6 135 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 R4GN57 208 aa12.41□□□□□ -0.42
HDLBP-236ENST00000477477 H0YCG3 227 aa12.4□□□□□ -0.42
HDLBP-236ENST00000477477 H3BQV1 296 aa12.4□□□□□ -0.42
HDLBP-236ENST00000477477 ECI2O75521 394 aa12.4□□□□□ -0.42
HDLBP-236ENST00000477477 SEC24AO95486 1093 aa12.4□□□□□ -0.42
HDLBP-236ENST00000477477 CXCL8P10145 99 aa12.4□□□□□ -0.42
HDLBP-236ENST00000477477 PTPN2P17706 415 aa12.4□□□□□ -0.42
HDLBP-236ENST00000477477 NCKAP1LP55160 1127 aa12.4□□□□□ -0.42
HDLBP-236ENST00000477477 CACNB1Q02641 598 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-236ENST00000477477 PRSS36Q5K4E3 855 aa12.4□□□□□ -0.42
HDLBP-236ENST00000477477 POTEHQ6S545 545 aa12.4□□□□□ -0.42
HDLBP-236ENST00000477477 TCEAL8Q8IYN2 117 aa12.4□□□□□ -0.42
HDLBP-236ENST00000477477 APPL2Q8NEU8 664 aa12.4□□□□□ -0.42
HDLBP-236ENST00000477477 DDX12PQ92771 950 aa12.4□□□□□ -0.42
HDLBP-236ENST00000477477 KCNN1Q92952 543 aa12.4□□□□□ -0.42
HDLBP-236ENST00000477477 CORO1BQ9BR76 489 aa12.4□□□□□ -0.42
HDLBP-236ENST00000477477 HAPLN2Q9GZV7 340 aa12.4□□□□□ -0.42
HDLBP-236ENST00000477477 PLEKHA5Q9HAU0 1116 aa12.4□□□□□ -0.42
HDLBP-236ENST00000477477 LARSQ9P2J5 1176 aaKnown RBP12.4□□□□□ -0.42
HDLBP-236ENST00000477477 AFF4Q9UHB7 1163 aaKnown RBP12.4□□□□□ -0.42
HDLBP-236ENST00000477477 PCDHB8Q9UN66 801 aa12.4□□□□□ -0.42
HDLBP-236ENST00000477477 NOTCH4Q99466 2003 aa12.39□□□□□ -0.43
HDLBP-236ENST00000477477 NPHP3-ACAD11A0A0J9YXS1 232 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms