RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 TMEM130Q8N3G9 435 aa31.06■■■□□ 2.56
VEGFA-211ENST00000476772 SMG8Q8ND04 991 aaKnown RBP31.06■■■□□ 2.56
VEGFA-211ENST00000476772 CHST12Q9NRB3 414 aa31.06■■■□□ 2.56
VEGFA-211ENST00000476772 C2CD2Q9Y426 696 aa31.06■■■□□ 2.56
VEGFA-211ENST00000476772 TRIP11Q15643 1979 aa31.05■■■□□ 2.56
VEGFA-211ENST00000476772 CCP110O43303 1012 aa31.05■■■□□ 2.56
VEGFA-211ENST00000476772 SGPL1O95470 568 aa31.05■■■□□ 2.56
VEGFA-211ENST00000476772 HSPA1AP0DMV8 641 aaKnown RBP31.05■■■□□ 2.56
VEGFA-211ENST00000476772 HSPA1BP0DMV9 641 aaKnown RBP31.05■■■□□ 2.56
VEGFA-211ENST00000476772 KIF11P52732 1056 aa31.05■■■□□ 2.56
VEGFA-211ENST00000476772 MYL6P60660 151 aa31.05■■■□□ 2.56
VEGFA-211ENST00000476772 GCNT1Q02742 428 aa31.05■■■□□ 2.56
VEGFA-211ENST00000476772 TRPC3Q13507 836 aa31.05■■■□□ 2.56
VEGFA-211ENST00000476772 REXO1L1PQ8IX06 675 aa31.05■■■□□ 2.56
VEGFA-211ENST00000476772 C1orf127Q8N9H9 656 aa31.05■■■□□ 2.56
VEGFA-211ENST00000476772 RNF39Q9H2S5 420 aa31.05■■■□□ 2.56
VEGFA-211ENST00000476772 REXO2Q9Y3B8 237 aaKnown RBP31.05■■■□□ 2.56
VEGFA-211ENST00000476772 EIF3CLB5ME19 914 aaKnown RBP31.04■■■□□ 2.56
VEGFA-211ENST00000476772 CLSTN1O94985 981 aa31.04■■■□□ 2.56
VEGFA-211ENST00000476772 MNX1P50219 401 aaPredicted RBP31.04■■■□□ 2.56
VEGFA-211ENST00000476772 ASTE1Q2TB18 679 aaPredicted RBP31.04■■■□□ 2.56
VEGFA-211ENST00000476772 SHC3Q92529 594 aa31.04■■■□□ 2.56
VEGFA-211ENST00000476772 ARMC5Q96C12 935 aa31.04■■■□□ 2.56
VEGFA-211ENST00000476772 KIF12Q96FN5 646 aa31.04■■■□□ 2.56
VEGFA-211ENST00000476772 EIF3CQ99613 913 aaKnown RBP31.04■■■□□ 2.56
VEGFA-211ENST00000476772 IMPG2Q9BZV3 1241 aa31.04■■■□□ 2.56
VEGFA-211ENST00000476772 SIX4Q9UIU6 781 aa31.04■■■□□ 2.56
VEGFA-211ENST00000476772 NUB1Q9Y5A7 615 aa31.04■■■□□ 2.56
VEGFA-211ENST00000476772 ASS1P00966 412 aaKnown RBP31.03■■■□□ 2.56
VEGFA-211ENST00000476772 TFRCP02786 760 aaKnown RBP31.03■■■□□ 2.56
VEGFA-211ENST00000476772 CTCFP49711 727 aaPredicted RBP31.03■■■□□ 2.56
VEGFA-211ENST00000476772 NT5DC4Q86YG4 428 aa31.03■■■□□ 2.56
VEGFA-211ENST00000476772 FMNL3Q8IVF7 1028 aa31.03■■■□□ 2.56
VEGFA-211ENST00000476772 ARID3AQ99856 593 aa31.03■■■□□ 2.56
VEGFA-211ENST00000476772 BZW2Q9Y6E2 419 aaKnown RBP31.03■■■□□ 2.56
VEGFA-211ENST00000476772 SQORQ9Y6N5 450 aa31.03■■■□□ 2.56
VEGFA-211ENST00000476772 UMODL1Q5DID0 1318 aa31.03■■■□□ 2.56
VEGFA-211ENST00000476772 AKR1B10O60218 316 aa31.03■■■□□ 2.56
VEGFA-211ENST00000476772 PTK2Q05397 1052 aa31.03■■■□□ 2.56
VEGFA-211ENST00000476772 PKN2Q16513 984 aaKnown RBP31.03■■■□□ 2.56
VEGFA-211ENST00000476772 ALKAL1Q6UXT8 129 aa31.03■■■□□ 2.56
VEGFA-211ENST00000476772 ENOSF1Q7L5Y1 443 aa31.03■■■□□ 2.56
VEGFA-211ENST00000476772 ZNF571Q7Z3V5 609 aaPredicted RBP31.03■■■□□ 2.56
VEGFA-211ENST00000476772 FAM81BQ96LP2 452 aa31.03■■■□□ 2.56
VEGFA-211ENST00000476772 ZMAT2Q96NC0 199 aaKnown RBP31.03■■■□□ 2.56
VEGFA-211ENST00000476772 FAM105AQ9NUU6 356 aa31.03■■■□□ 2.56
VEGFA-211ENST00000476772 CNTN3Q9P232 1028 aa31.03■■■□□ 2.56
VEGFA-211ENST00000476772 PARP2Q9UGN5 583 aa31.03■■■□□ 2.56
VEGFA-211ENST00000476772 PCDHB2Q9Y5E7 798 aa31.03■■■□□ 2.56
VEGFA-211ENST00000476772 CD4P01730 458 aa31.02■■■□□ 2.56
VEGFA-211ENST00000476772 ITGB3P05106 788 aa31.02■■■□□ 2.56
VEGFA-211ENST00000476772 KRT19P08727 400 aa31.02■■■□□ 2.56
VEGFA-211ENST00000476772 GUCY2FP51841 1108 aa31.02■■■□□ 2.56
VEGFA-211ENST00000476772 SGSM1Q2NKQ1 1148 aa31.02■■■□□ 2.56
VEGFA-211ENST00000476772 USP38Q8NB14 1042 aa31.02■■■□□ 2.56
VEGFA-211ENST00000476772 CAGE1Q8TC20 777 aa31.02■■■□□ 2.56
VEGFA-211ENST00000476772 KLK14Q9P0G3 267 aa31.02■■■□□ 2.56
VEGFA-211ENST00000476772 DERAQ9Y315 318 aa31.02■■■□□ 2.56
VEGFA-211ENST00000476772 A0A0U1RQJ8 604 aa31.01■■■□□ 2.55
VEGFA-211ENST00000476772 ZNF263O14978 683 aa31.01■■■□□ 2.55
VEGFA-211ENST00000476772 ZSCAN20P17040 1043 aaPredicted RBP31.01■■■□□ 2.55
VEGFA-211ENST00000476772 USP8P40818 1118 aa31.01■■■□□ 2.55
VEGFA-211ENST00000476772 CUL2Q13617 745 aa31.01■■■□□ 2.55
VEGFA-211ENST00000476772 MBTPS1Q14703 1052 aa31.01■■■□□ 2.55
VEGFA-211ENST00000476772 CXorf38Q8TB03 319 aa31.01■■■□□ 2.55
VEGFA-211ENST00000476772 ATRIPQ8WXE1 791 aa31.01■■■□□ 2.55
VEGFA-211ENST00000476772 XYLT2Q9H1B5 865 aa31.01■■■□□ 2.55
VEGFA-211ENST00000476772 PDCD11Q14690 1871 aaKnown RBP31.01■■■□□ 2.55
VEGFA-211ENST00000476772 MGEA5O60502 916 aa31■■■□□ 2.55
VEGFA-211ENST00000476772 CCDC172P0C7W6 258 aa31■■■□□ 2.55
VEGFA-211ENST00000476772 ATN1P54259 1190 aaPredicted RBP31■■■□□ 2.55
VEGFA-211ENST00000476772 CYP27A1Q02318 531 aa31■■■□□ 2.55
VEGFA-211ENST00000476772 ZNF699Q32M78 642 aa31■■■□□ 2.55
VEGFA-211ENST00000476772 GLRA4Q5JXX5 417 aa31■■■□□ 2.55
VEGFA-211ENST00000476772 FAM71AQ8IYT1 594 aa31■■■□□ 2.55
VEGFA-211ENST00000476772 IPO7O95373 1038 aaKnown RBP31■■■□□ 2.55
VEGFA-211ENST00000476772 GFPT1Q06210 699 aaPredicted RBP31■■■□□ 2.55
VEGFA-211ENST00000476772 DSC3Q14574 896 aa31■■■□□ 2.55
VEGFA-211ENST00000476772 RNF19AQ9NV58 838 aa31■■■□□ 2.55
VEGFA-211ENST00000476772 DPP3Q9NY33 737 aa31■■■□□ 2.55
VEGFA-211ENST00000476772 PQBP1O60828 265 aaKnown RBP30.99■■■□□ 2.55
VEGFA-211ENST00000476772 LCA5LO95447 670 aa30.99■■■□□ 2.55
VEGFA-211ENST00000476772 KRT83P78385 493 aa30.99■■■□□ 2.55
VEGFA-211ENST00000476772 C16orf45Q96MC5 204 aaPredicted RBP30.99■■■□□ 2.55
VEGFA-211ENST00000476772 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP30.99■■■□□ 2.55
VEGFA-211ENST00000476772 ITGA11Q9UKX5 1188 aa30.99■■■□□ 2.55
VEGFA-211ENST00000476772 TBXAS1P24557 533 aaPredicted RBP30.98■■■□□ 2.55
VEGFA-211ENST00000476772 POLR2BP30876 1174 aaKnown RBP30.98■■■□□ 2.55
VEGFA-211ENST00000476772 SPA17Q15506 151 aa30.98■■■□□ 2.55
VEGFA-211ENST00000476772 ZBTB6Q15916 424 aa30.98■■■□□ 2.55
VEGFA-211ENST00000476772 XKR4Q5GH76 650 aa30.98■■■□□ 2.55
VEGFA-211ENST00000476772 SLC39A5Q6ZMH5 540 aa30.98■■■□□ 2.55
VEGFA-211ENST00000476772 LRRC8DQ7L1W4 858 aa30.98■■■□□ 2.55
VEGFA-211ENST00000476772 OFD1O75665 1012 aa30.97■■■□□ 2.55
VEGFA-211ENST00000476772 SELPP16109 830 aa30.97■■■□□ 2.55
VEGFA-211ENST00000476772 BFSP2Q13515 415 aa30.97■■■□□ 2.55
VEGFA-211ENST00000476772 NIF3L1Q9GZT8 377 aa30.97■■■□□ 2.55
VEGFA-211ENST00000476772 TUBGCP4Q9UGJ1 667 aa30.97■■■□□ 2.55
VEGFA-211ENST00000476772 ADAMTS1Q9UHI8 967 aa30.97■■■□□ 2.55
VEGFA-211ENST00000476772 A0A087X0T9 212 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms