RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 MCPH1Q8NEM0 835 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 ZNF461Q8TAF7 563 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 ZSWIM3Q96MP5 696 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 MTMR9Q96QG7 549 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 ADPGKQ9BRR6 497 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 IER2Q9BTL4 223 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 KIFC3Q9BVG8 833 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 TRMT61BQ9BVS5 477 aaKnown RBP21.79■■□□□ 1.08
CCDC78-208ENST00000471861 ZFP14Q9HCL3 533 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 ZNF334Q9HCZ1 680 aaPredicted RBP21.79■■□□□ 1.08
CCDC78-208ENST00000471861 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.78■■□□□ 1.08
CCDC78-208ENST00000471861 MOSPD3O75425 235 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 LRG1P02750 347 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 RETP07949 1114 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 LIG1P18858 919 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 ATP2B1P20020 1258 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 TXKP42681 527 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 NRLP54845 237 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 TMEM132AQ24JP5 1023 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 PRR23BQ6ZRT6 265 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 FAM3CQ92520 227 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 TM6SF1Q9BZW5 370 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 C2orf40Q9H1Z8 148 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 LMAN1LQ9HAT1 526 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 TRPV5Q9NQA5 729 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 SEMA4GQ9NTN9 838 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 RAB23Q9ULC3 237 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 PIAS3Q9Y6X2 628 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 TRIP11Q15643 1979 aa21.78■■□□□ 1.08
CCDC78-208ENST00000471861 ARNTLO00327 626 aa21.77■■□□□ 1.08
CCDC78-208ENST00000471861 GDF9O60383 454 aa21.77■■□□□ 1.08
CCDC78-208ENST00000471861 NEMFO60524 1076 aa21.77■■□□□ 1.08
CCDC78-208ENST00000471861 LRP3O75074 770 aa21.77■■□□□ 1.08
CCDC78-208ENST00000471861 MED24O75448 989 aa21.77■■□□□ 1.08
CCDC78-208ENST00000471861 CHRNB1P11230 501 aa21.77■■□□□ 1.08
CCDC78-208ENST00000471861 KRT2P35908 639 aa21.77■■□□□ 1.08
CCDC78-208ENST00000471861 CCR3P51677 355 aa21.77■■□□□ 1.08
CCDC78-208ENST00000471861 SRSF5Q13243 272 aaKnown RBP21.77■■□□□ 1.08
CCDC78-208ENST00000471861 DCAF4L1Q3SXM0 396 aa21.77■■□□□ 1.08
CCDC78-208ENST00000471861 WDR44Q5JSH3 913 aa21.77■■□□□ 1.08
CCDC78-208ENST00000471861 NT5DC1Q5TFE4 455 aa21.77■■□□□ 1.08
CCDC78-208ENST00000471861 CATSPER3Q86XQ3 398 aa21.77■■□□□ 1.08
CCDC78-208ENST00000471861 CEP120Q8N960 986 aa21.77■■□□□ 1.08
CCDC78-208ENST00000471861 IRF7Q92985 503 aa21.77■■□□□ 1.08
CCDC78-208ENST00000471861 TMEM60Q9H2L4 133 aa21.77■■□□□ 1.08
CCDC78-208ENST00000471861 PDRG1Q9NUG6 133 aa21.77■■□□□ 1.08
CCDC78-208ENST00000471861 INSL5Q9Y5Q6 135 aa21.77■■□□□ 1.08
CCDC78-208ENST00000471861 PRRG1O14668 218 aa21.76■■□□□ 1.07
CCDC78-208ENST00000471861 HRO43593 1189 aa21.76■■□□□ 1.07
CCDC78-208ENST00000471861 MICAL2O94851 1124 aa21.76■■□□□ 1.07
CCDC78-208ENST00000471861 FDPSP14324 419 aaKnown RBP21.76■■□□□ 1.07
CCDC78-208ENST00000471861 ATF2P15336 505 aa21.76■■□□□ 1.07
CCDC78-208ENST00000471861 GDI1P31150 447 aa21.76■■□□□ 1.07
CCDC78-208ENST00000471861 NAMPTP43490 491 aa21.76■■□□□ 1.07
CCDC78-208ENST00000471861 PRR23CQ6ZRP0 262 aa21.76■■□□□ 1.07
CCDC78-208ENST00000471861 TCEAL8Q8IYN2 117 aa21.76■■□□□ 1.07
CCDC78-208ENST00000471861 HS6ST3Q8IZP7 471 aa21.76■■□□□ 1.07
CCDC78-208ENST00000471861 UROC1Q96N76 676 aa21.76■■□□□ 1.07
CCDC78-208ENST00000471861 TPCN1Q9ULQ1 816 aa21.76■■□□□ 1.07
CCDC78-208ENST00000471861 CHD6Q8TD26 2715 aa21.76■■□□□ 1.07
CCDC78-208ENST00000471861 SMIM28A0A1B0GU29 152 aa21.75■■□□□ 1.07
CCDC78-208ENST00000471861 PFKFB2O60825 505 aa21.75■■□□□ 1.07
CCDC78-208ENST00000471861 PSMC3P17980 439 aa21.75■■□□□ 1.07
CCDC78-208ENST00000471861 HOXC13P31276 330 aa21.75■■□□□ 1.07
CCDC78-208ENST00000471861 VIPR2P41587 438 aa21.75■■□□□ 1.07
CCDC78-208ENST00000471861 PDZD4Q76G19 769 aaPredicted RBP21.75■■□□□ 1.07
CCDC78-208ENST00000471861 SMARCD2Q92925 531 aa21.75■■□□□ 1.07
CCDC78-208ENST00000471861 CYP4F11Q9HBI6 524 aa21.75■■□□□ 1.07
CCDC78-208ENST00000471861 CEP72Q9P209 647 aa21.75■■□□□ 1.07
CCDC78-208ENST00000471861 ORC3Q9UBD5 711 aaPredicted RBP21.75■■□□□ 1.07
CCDC78-208ENST00000471861 CHURC1-FNTBB4DL54 471 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 K7ESF4 209 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 TRAPPC3O43617 180 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 GJA1P17302 382 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 CCNE1P24864 410 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 ELF1P32519 619 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 CXCL12P48061 93 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 FNTBP49356 437 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 ARPP19P56211 112 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 SIM2Q14190 667 aaPredicted RBP21.74■■□□□ 1.07
CCDC78-208ENST00000471861 MRPL58Q14197 206 aaKnown RBP21.74■■□□□ 1.07
CCDC78-208ENST00000471861 PPP2R5DQ14738 602 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 CSRP2Q16527 193 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 XKR4Q5GH76 650 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 ATF7IP2Q5U623 682 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 DEPTORQ8TB45 409 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 RSPRY1Q96DX4 576 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 ZMAT2Q96NC0 199 aaKnown RBP21.74■■□□□ 1.07
CCDC78-208ENST00000471861 POLD4Q9HCU8 107 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 TUFT1Q9NNX1 390 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 RBM12Q9NTZ6 932 aaKnown RBP21.74■■□□□ 1.07
CCDC78-208ENST00000471861 C2orf42Q9NWW7 574 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 FBXL5Q9UKA1 691 aa21.74■■□□□ 1.07
CCDC78-208ENST00000471861 ZNF197O14709 1029 aa21.73■■□□□ 1.07
CCDC78-208ENST00000471861 CYP11B2P19099 503 aa21.73■■□□□ 1.07
CCDC78-208ENST00000471861 PTGDRQ13258 359 aa21.73■■□□□ 1.07
CCDC78-208ENST00000471861 PADI6Q6TGC4 694 aa21.73■■□□□ 1.07
CCDC78-208ENST00000471861 ALKAL1Q6UXT8 129 aa21.73■■□□□ 1.07
CCDC78-208ENST00000471861 DEPDC1BQ8WUY9 529 aa21.73■■□□□ 1.07
CCDC78-208ENST00000471861 TRPV4Q9HBA0 871 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms