RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 SIK3Q9Y2K2 1263 aa20.73■□□□□ 0.91
PSPC1-203ENST00000471658 RALGAPA2Q2PPJ7 1873 aa20.73■□□□□ 0.91
PSPC1-203ENST00000471658 PPEF2O14830 753 aa20.72■□□□□ 0.91
PSPC1-203ENST00000471658 BAIAP3O94812 1187 aa20.72■□□□□ 0.91
PSPC1-203ENST00000471658 HLA-DRAP01903 254 aa20.72■□□□□ 0.91
PSPC1-203ENST00000471658 AMHP03971 560 aa20.72■□□□□ 0.91
PSPC1-203ENST00000471658 THP07101 528 aa20.72■□□□□ 0.91
PSPC1-203ENST00000471658 MAGEA10P43363 369 aaPredicted RBP20.72■□□□□ 0.91
PSPC1-203ENST00000471658 AP3M2P53677 418 aa20.72■□□□□ 0.91
PSPC1-203ENST00000471658 EXOC3L4Q17RC7 722 aa20.72■□□□□ 0.91
PSPC1-203ENST00000471658 NOMO2Q5JPE7 1267 aa20.72■□□□□ 0.91
PSPC1-203ENST00000471658 DPY19L2P1Q6NXN4 242 aa20.72■□□□□ 0.91
PSPC1-203ENST00000471658 GBP6Q6ZN66 633 aa20.72■□□□□ 0.91
PSPC1-203ENST00000471658 EHBP1Q8NDI1 1231 aa20.72■□□□□ 0.91
PSPC1-203ENST00000471658 MRFAP1L1Q96HT8 127 aa20.72■□□□□ 0.91
PSPC1-203ENST00000471658 ERGIC2Q96RQ1 377 aa20.72■□□□□ 0.91
PSPC1-203ENST00000471658 PI4K2AQ9BTU6 479 aa20.72■□□□□ 0.91
PSPC1-203ENST00000471658 INTS2Q9H0H0 1204 aaKnown RBP20.72■□□□□ 0.91
PSPC1-203ENST00000471658 UBQLN1Q9UMX0 589 aaKnown RBP20.72■□□□□ 0.91
PSPC1-203ENST00000471658 COQ4Q9Y3A0 265 aa20.72■□□□□ 0.91
PSPC1-203ENST00000471658 PMM2O15305 246 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 INPPL1O15357 1258 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 P4HA2O15460 535 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 EFCAB14O75071 495 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 N4BP1O75113 896 aaKnown RBP20.71■□□□□ 0.91
PSPC1-203ENST00000471658 ITGB3P05106 788 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 KRT19P08727 400 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 PON1P27169 355 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 LRMPQ12912 555 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 PSRC1Q6PGN9 363 aaPredicted RBP20.71■□□□□ 0.91
PSPC1-203ENST00000471658 NT5DC4Q86YG4 428 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 FBXL13Q8NEE6 735 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 BEST2Q8NFU1 509 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 RABGGTAQ92696 567 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 PCMTD1Q96MG8 357 aaPredicted RBP20.71■□□□□ 0.91
PSPC1-203ENST00000471658 LSM14BQ9BX40 385 aaKnown RBP20.71■□□□□ 0.91
PSPC1-203ENST00000471658 RAB20Q9NX57 234 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 GCNT4Q9P109 453 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 HCSTQ9UBK5 93 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 B4GALT3O60512 393 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 TPM3P06753 285 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 IGFBP6P24592 240 aaPredicted RBP20.71■□□□□ 0.91
PSPC1-203ENST00000471658 PIK3CAP42336 1068 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 KCNJ6P48051 423 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 MYL6P60660 151 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 NCOA4Q13772 614 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 PAN2Q504Q3 1202 aaKnown RBP20.71■□□□□ 0.91
PSPC1-203ENST00000471658 ZNF280BQ86YH2 543 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 VSTM4Q8IW00 320 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 SIX2Q9NPC8 291 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 AGAP1Q9UPQ3 857 aa20.71■□□□□ 0.91
PSPC1-203ENST00000471658 A0A1W2PQC6 194 aa20.7■□□□□ 0.9
PSPC1-203ENST00000471658 GTPBP10A4D1E9 387 aaKnown RBP20.7■□□□□ 0.9
PSPC1-203ENST00000471658 TBKBP1A7MCY6 615 aa20.7■□□□□ 0.9
PSPC1-203ENST00000471658 EPHB6O15197 1021 aa20.7■□□□□ 0.9
PSPC1-203ENST00000471658 DGKIO75912 1065 aa20.7■□□□□ 0.9
PSPC1-203ENST00000471658 DDHD2O94830 711 aa20.7■□□□□ 0.9
PSPC1-203ENST00000471658 POLR2BP30876 1174 aaKnown RBP20.7■□□□□ 0.9
PSPC1-203ENST00000471658 SPOPLQ6IQ16 392 aa20.7■□□□□ 0.9
PSPC1-203ENST00000471658 ABI1Q8IZP0 508 aa20.7■□□□□ 0.9
PSPC1-203ENST00000471658 HERVK_113Q902F9 699 aa20.7■□□□□ 0.9
PSPC1-203ENST00000471658 PAAF1Q9BRP4 392 aa20.7■□□□□ 0.9
PSPC1-203ENST00000471658 TBC1D13Q9NVG8 400 aa20.7■□□□□ 0.9
PSPC1-203ENST00000471658 PDCD11Q14690 1871 aaKnown RBP20.69■□□□□ 0.9
PSPC1-203ENST00000471658 CASTOR2A6NHX0 329 aa20.69■□□□□ 0.9
PSPC1-203ENST00000471658 GRIK3Q13003 919 aa20.69■□□□□ 0.9
PSPC1-203ENST00000471658 TRPC3Q13507 836 aa20.69■□□□□ 0.9
PSPC1-203ENST00000471658 C9orf50Q5SZB4 431 aa20.69■□□□□ 0.9
PSPC1-203ENST00000471658 GJB7Q6PEY0 223 aa20.69■□□□□ 0.9
PSPC1-203ENST00000471658 TMC6Q7Z403 805 aa20.69■□□□□ 0.9
PSPC1-203ENST00000471658 URGCPQ8TCY9 931 aa20.69■□□□□ 0.9
PSPC1-203ENST00000471658 TATDN2Q93075 761 aa20.69■□□□□ 0.9
PSPC1-203ENST00000471658 TSPAN18Q96SJ8 248 aa20.69■□□□□ 0.9
PSPC1-203ENST00000471658 FAM207AQ9NSI2 230 aaPredicted RBP20.69■□□□□ 0.9
PSPC1-203ENST00000471658 ITGA11Q9UKX5 1188 aa20.69■□□□□ 0.9
PSPC1-203ENST00000471658 CAPN15O75808 1086 aa20.68■□□□□ 0.9
PSPC1-203ENST00000471658 NOL4O94818 638 aa20.68■□□□□ 0.9
PSPC1-203ENST00000471658 CYP3A5P20815 502 aa20.68■□□□□ 0.9
PSPC1-203ENST00000471658 CETN1Q12798 172 aa20.68■□□□□ 0.9
PSPC1-203ENST00000471658 C9orf57Q5W0N0 161 aa20.68■□□□□ 0.9
PSPC1-203ENST00000471658 TRIM65Q6PJ69 517 aa20.68■□□□□ 0.9
PSPC1-203ENST00000471658 ARHGEF19Q8IW93 802 aa20.68■□□□□ 0.9
PSPC1-203ENST00000471658 SPC24Q8NBT2 197 aa20.68■□□□□ 0.9
PSPC1-203ENST00000471658 APOBEC3GQ9HC16 384 aaKnown RBP20.68■□□□□ 0.9
PSPC1-203ENST00000471658 ANO9A1A5B4 782 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 HOXA2O43364 376 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 XPOTO43592 962 aaKnown RBP20.67■□□□□ 0.9
PSPC1-203ENST00000471658 RBP5P82980 135 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 XYLT2Q9H1B5 865 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 SLC38A7Q9NVC3 462 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 RNF216Q9NWF9 866 aaPredicted RBP20.67■□□□□ 0.9
PSPC1-203ENST00000471658 DNAJB4Q9UDY4 337 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 AJAP1Q9UKB5 411 aaPredicted RBP20.67■□□□□ 0.9
PSPC1-203ENST00000471658 PTPRSQ13332 1948 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 H0YGN5 161 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 RNF225M0QZC1 329 aaPredicted RBP20.67■□□□□ 0.9
PSPC1-203ENST00000471658 PIRO00625 290 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 LRPAP1P30533 357 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 CLCNKBP51801 687 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 RNASELQ05823 741 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms