RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 SLITRK3O94933 977 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 HSPA4P34932 840 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 RBM25P49756 843 aaKnown RBP13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 CLCNKBP51801 687 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 KPNA1P52294 538 aaPredicted RBP13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 SRSF5Q13243 272 aaKnown RBP13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 DCAF4L1Q3SXM0 396 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 PRSS36Q5K4E3 855 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 C1orf228Q6PIY5 440 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 VITQ6UXI7 678 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 MAMSTRQ6ZN01 415 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 APBB1IPQ7Z5R6 666 aaPredicted RBP13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 LONP2Q86WA8 852 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 SPEM1Q8N4L4 309 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 MCPH1Q8NEM0 835 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 ZNF461Q8TAF7 563 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 DEPTORQ8TB45 409 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 PIGOQ8TEQ8 1089 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 SMARCD2Q92925 531 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 TCEAL4Q96EI5 215 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 MSANTD3Q96H12 275 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 GPRC5CQ9NQ84 441 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 INSL5Q9Y5Q6 135 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 CFAP47Q6ZTR5 3102 aa13.77□□□□□ -0.21
HIGD1A-205ENST00000470543 CNOT1A5YKK6 2376 aaKnown RBP13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 SHISA7A6NL88 538 aa13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 LYPLA2O95372 231 aa13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 MYL4P12829 197 aa13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 ATP2B1P20020 1258 aa13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 BRCC3P46736 316 aa13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 CALCRLQ16602 461 aa13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 FAM187BQ17R55 369 aa13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 CDCA2Q69YH5 1023 aaPredicted RBP13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 MAP4K3Q8IVH8 894 aa13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 FAM160A2Q8N612 972 aaPredicted RBP13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 KCNB2Q92953 911 aa13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 ZNF512Q96ME7 567 aaPredicted RBP13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 BRMS1Q9HCU9 246 aa13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 TRPV5Q9NQA5 729 aa13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 ASAH2Q9NR71 780 aa13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 RALYQ9UKM9 306 aaKnown RBP13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 PCDHA12Q9UN75 941 aa13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 SPAG17Q6Q759 2223 aa13.76□□□□□ -0.21
HIGD1A-205ENST00000470543 ZFHX4Q86UP3 3567 aa13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 H7C4K7 107 aa13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 HRO43593 1189 aa13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 MICAL2O94851 1124 aa13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 CHRNB1P11230 501 aa13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 PMLP29590 882 aa13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 VIPR2P41587 438 aa13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 YARSP54577 528 aaKnown RBP13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 EVCP57679 992 aa13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 PTGDRQ13258 359 aa13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 NAB2Q15742 525 aa13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 N4BP2L1Q5TBK1 243 aaPredicted RBP13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 ZNF687Q8N1G0 1237 aa13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 LEMD2Q8NC56 503 aa13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 ZSCAN18Q8TBC5 510 aaPredicted RBP13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 CXCL16Q9H2A7 254 aa13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 FZD8Q9H461 694 aa13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 GOLGA2P5Q9HBQ8 144 aa13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 NUB1Q9Y5A7 615 aa13.75□□□□□ -0.21
HIGD1A-205ENST00000470543 FAM208BQ5VWN6 2430 aa13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 CHD6Q8TD26 2715 aa13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 TTLL13PA6NNM8 815 aa13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 SLC38A8A6NNN8 435 aa13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 CPB1P15086 417 aa13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 ATF2P15336 505 aa13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 TWF1Q12792 350 aa13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 TOB2Q14106 344 aaPredicted RBP13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 UPP1Q16831 310 aa13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 SLC8B1Q6J4K2 584 aa13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 RUFY3Q7L099 469 aa13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 TCEAL8Q8IYN2 117 aa13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 E2F7Q96AV8 911 aa13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 ZNF274Q96GC6 653 aaPredicted RBP13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 PPP1R10Q96QC0 940 aaKnown RBP13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 LARP6Q9BRS8 491 aaKnown RBP13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 TTC12Q9H892 705 aaPredicted RBP13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 TOPORSQ9NS56 1045 aaPredicted RBP13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 RBM12Q9NTZ6 932 aaKnown RBP13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 CYP46A1Q9Y6A2 500 aa13.74□□□□□ -0.21
HIGD1A-205ENST00000470543 A0A087WWV3 80 aa13.73□□□□□ -0.21
HIGD1A-205ENST00000470543 HEPACAM2A8MVW5 462 aa13.73□□□□□ -0.21
HIGD1A-205ENST00000470543 ACKR2O00590 384 aa13.73□□□□□ -0.21
HIGD1A-205ENST00000470543 PODXLO00592 558 aa13.73□□□□□ -0.21
HIGD1A-205ENST00000470543 AXIN1O15169 862 aa13.73□□□□□ -0.21
HIGD1A-205ENST00000470543 NEMFO60524 1076 aa13.73□□□□□ -0.21
HIGD1A-205ENST00000470543 REC8O95072 547 aa13.73□□□□□ -0.21
HIGD1A-205ENST00000470543 CCDC192P0DO97 292 aa13.73□□□□□ -0.21
HIGD1A-205ENST00000470543 GJA1P17302 382 aa13.73□□□□□ -0.21
HIGD1A-205ENST00000470543 CCR2P41597 374 aa13.73□□□□□ -0.21
HIGD1A-205ENST00000470543 TXKP42681 527 aa13.73□□□□□ -0.21
HIGD1A-205ENST00000470543 LIMK1P53667 647 aa13.73□□□□□ -0.21
HIGD1A-205ENST00000470543 PPP2R5AQ15172 486 aa13.73□□□□□ -0.21
HIGD1A-205ENST00000470543 SF3A2Q15428 464 aaKnown RBP13.73□□□□□ -0.21
HIGD1A-205ENST00000470543 CCDC6Q16204 474 aa13.73□□□□□ -0.21
HIGD1A-205ENST00000470543 CTXN3Q4LDR2 81 aa13.73□□□□□ -0.21
HIGD1A-205ENST00000470543 DGKKQ5KSL6 1271 aa13.73□□□□□ -0.21
HIGD1A-205ENST00000470543 EEF1DP3Q658K8 133 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms