RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 AFF1P51825 1210 aaKnown RBP11.21□□□□□ -0.61
THBS3-206ENST00000469769 PPIGQ13427 754 aaKnown RBP eCLIP11.21□□□□□ -0.61
THBS3-206ENST00000469769 TRIM14Q14142 442 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 CLLU1OSQ5K130 101 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 KLHDC7AQ5VTJ3 777 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 LMBRD2Q68DH5 695 aaPredicted RBP11.21□□□□□ -0.61
THBS3-206ENST00000469769 SCARA3Q6AZY7 606 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 DEFB128Q7Z7B8 93 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 NPAS4Q8IUM7 802 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 TAF4BQ92750 862 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 LPPQ93052 612 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 TOP1MTQ969P6 601 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 KIF12Q96FN5 646 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 ZFP42Q96MM3 310 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 SLC38A7Q9NVC3 462 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 KLK14Q9P0G3 267 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 GCNT4Q9P109 453 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 PARP2Q9UGN5 583 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 ITGA11Q9UKX5 1188 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 PLAGL2Q9UPG8 496 aa11.21□□□□□ -0.61
THBS3-206ENST00000469769 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.21□□□□□ -0.61
THBS3-206ENST00000469769 COL4A6Q14031 1691 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 SZT2Q5T011 3432 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 PTPRSQ13332 1948 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 PIRO00625 290 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 EPHB6O15197 1021 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 HOXA2O43364 376 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 EVI5O60447 810 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 LRRN2O75325 713 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 TNNC2P02585 160 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 GYPCP04921 128 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 THP07101 528 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 TMEM191BP0C7N4 346 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 ATICP31939 592 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 MLH1P40692 756 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 KLK7P49862 253 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 FXR1P51114 621 aaKnown RBP eCLIP11.2□□□□□ -0.62
THBS3-206ENST00000469769 TFAMQ00059 246 aaKnown RBP11.2□□□□□ -0.62
THBS3-206ENST00000469769 DSC1Q08554 894 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 CCDC173Q0VFZ6 552 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 GRIK3Q13003 919 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 NCOA4Q13772 614 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 SGSM1Q2NKQ1 1148 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 PHLDB3Q6NSJ2 640 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.2□□□□□ -0.62
THBS3-206ENST00000469769 LRRC52Q8N7C0 313 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 BEST2Q8NFU1 509 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 HELQQ8TDG4 1101 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 ANP32BQ92688 251 aaKnown RBP11.2□□□□□ -0.62
THBS3-206ENST00000469769 BADQ92934 168 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 JAKMIP2Q96AA8 810 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 FAM212AQ96EL1 285 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 FAM84AQ96KN4 292 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 FAM81BQ96LP2 452 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 CRACR2AQ9BSW2 395 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 APOL6Q9BWW8 343 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 INTS2Q9H0H0 1204 aaKnown RBP11.2□□□□□ -0.62
THBS3-206ENST00000469769 RC3H2Q9HBD1 1191 aaKnown RBP11.2□□□□□ -0.62
THBS3-206ENST00000469769 DPP3Q9NY33 737 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 KANSL3Q9P2N6 904 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 APEX2Q9UBZ4 518 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 PRKAG2Q9UGJ0 569 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 MYO6Q9UM54 1294 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 CAPN11Q9UMQ6 739 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 PCDHB7Q9Y5E2 793 aa11.2□□□□□ -0.62
THBS3-206ENST00000469769 RNF225M0QZC1 329 aaPredicted RBP11.19□□□□□ -0.62
THBS3-206ENST00000469769 PES1O00541 588 aaKnown RBP11.19□□□□□ -0.62
THBS3-206ENST00000469769 DGKIO75912 1065 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 ACTN1P12814 892 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 UCHL3P15374 230 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 FECHP22830 423 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 PAX3P23760 479 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 HNRNPH3P31942 346 aaKnown RBP11.19□□□□□ -0.62
THBS3-206ENST00000469769 RPL9P32969 192 aaKnown RBP11.19□□□□□ -0.62
THBS3-206ENST00000469769 RBP5P82980 135 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 GCNT1Q02742 428 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 FPGSQ05932 587 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 SOX4Q06945 474 aaPredicted RBP11.19□□□□□ -0.62
THBS3-206ENST00000469769 PTPN21Q16825 1174 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 NOMO2Q5JPE7 1267 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 GLRA4Q5JXX5 417 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 TMEM240Q5SV17 173 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 RASIP1Q5U651 963 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 C9orf57Q5W0N0 161 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 GLB1LQ6UWU2 654 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 TMC6Q7Z403 805 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 LIMS2Q7Z4I7 341 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 C7orf61Q8IZ16 206 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 HERVK_113Q902F9 699 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 BAP1Q92560 729 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 C18orf25Q96B23 403 aaPredicted RBP11.19□□□□□ -0.62
THBS3-206ENST00000469769 ZNF689Q96CS4 500 aaPredicted RBP11.19□□□□□ -0.62
THBS3-206ENST00000469769 CASD1Q96PB1 797 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 RPS6KC1Q96S38 1066 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 LSM14BQ9BX40 385 aaKnown RBP11.19□□□□□ -0.62
THBS3-206ENST00000469769 FAM124BQ9H5Z6 455 aaPredicted RBP11.19□□□□□ -0.62
THBS3-206ENST00000469769 MMRN2Q9H8L6 949 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 APOBEC3GQ9HC16 384 aaKnown RBP11.19□□□□□ -0.62
THBS3-206ENST00000469769 CEP72Q9P209 647 aa11.19□□□□□ -0.62
THBS3-206ENST00000469769 TUBGCP4Q9UGJ1 667 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms