RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 IRAK1BP1Q5VVH5 260 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 ZFP42Q96MM3 310 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 CYTH2Q99418 400 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 MOV10L1Q9BXT6 1211 aaKnown RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 RUBCNLQ9H714 662 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 SMYD3Q9H7B4 428 aa7.43□□□□□ -1.22
CD46-212ENST00000469535 PPARGC1AQ9UBK2 798 aaKnown RBP7.43□□□□□ -1.22
CD46-212ENST00000469535 UBXN8O00124 270 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 PDHXO00330 501 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 DIAPH2O60879 1101 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 SEC31AO94979 1220 aaKnown RBP7.42□□□□□ -1.22
CD46-212ENST00000469535 PRR29P0C7W0 189 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 SP100P23497 879 aaPredicted RBP7.42□□□□□ -1.22
CD46-212ENST00000469535 RFC5P40937 340 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 EIF3EP60228 445 aaKnown RBP7.42□□□□□ -1.22
CD46-212ENST00000469535 PDIA2Q13087 525 aaKnown RBP7.42□□□□□ -1.22
CD46-212ENST00000469535 EFTUD2Q15029 972 aaKnown RBP eCLIP7.42□□□□□ -1.223e-14■■■■□ 23.3
CD46-212ENST00000469535 C11orf74Q86VG3 221 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 B4GALNT2Q8NHY0 566 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 C18orf8Q96DM3 657 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 NAF1Q96HR8 494 aaKnown RBP7.42□□□□□ -1.22
CD46-212ENST00000469535 CIPCQ9C0C6 399 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 PREX2Q70Z35 1606 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 ASAP2O43150 1006 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 KDM1AO60341 852 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 ASS1P00966 412 aaKnown RBP7.42□□□□□ -1.22
CD46-212ENST00000469535 SOAT1P35610 550 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 ERAP2Q6P179 960 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 RD3Q7Z3Z2 195 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 PROM2Q8N271 834 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 SENP6Q9GZR1 1112 aaPredicted RBP7.42□□□□□ -1.22
CD46-212ENST00000469535 ABCA9Q8IUA7 1624 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 SPAG7O75391 227 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 APBA1Q02410 837 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.42□□□□□ -1.22
CD46-212ENST00000469535 CHMP1BQ7LBR1 199 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 CACUL1Q86Y37 369 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 ERO1BQ86YB8 467 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 WDR75Q8IWA0 830 aaKnown RBP7.42□□□□□ -1.22
CD46-212ENST00000469535 ZBED8Q8IZ13 594 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 SLC30A5Q8TAD4 765 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 CD274Q9NZQ7 290 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 MSRAQ9UJ68 235 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 TPX2Q9ULW0 747 aaKnown RBP7.42□□□□□ -1.22
CD46-212ENST00000469535 APOBEC2Q9Y235 224 aaKnown RBP7.42□□□□□ -1.22
CD46-212ENST00000469535 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.42□□□□□ -1.22
CD46-212ENST00000469535 HOXA2O43364 376 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 EFCAB14O75071 495 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 B3GAT3O94766 335 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 PCDH8O95206 1070 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 SUPT20HL2P0C7V6 817 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 PDGFRAP16234 1089 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 AVPR1AP37288 418 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 EPHB3P54753 998 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 ZNF177Q13360 481 aaPredicted RBP7.42□□□□□ -1.22
CD46-212ENST00000469535 CTXN3Q4LDR2 81 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 NBPF10Q6P3W6 841 aaKnown RBP7.42□□□□□ -1.22
CD46-212ENST00000469535 NBPF15Q8N660 670 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 CSGALNACT1Q8TDX6 532 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 CPB2Q96IY4 423 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 GLIS2Q9BZE0 524 aaPredicted RBP7.42□□□□□ -1.22
CD46-212ENST00000469535 CATSPERBQ9H7T0 1116 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 CHST12Q9NRB3 414 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 KRT14P02533 472 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 IFT88Q13099 833 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 NBPF20Q3BBV1 942 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 TRIM72Q6ZMU5 477 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 LRRC37BQ96QE4 947 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 ADGRA2Q96PE1 1338 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 IL18RAPO95256 599 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 WEE2P0C1S8 567 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 AARSP49588 968 aaKnown RBP eCLIP7.42□□□□□ -1.22
CD46-212ENST00000469535 TGFB2P61812 414 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 MIB1Q86YT6 1006 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 RHOT1Q8IXI2 618 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 PHACTR4Q8IZ21 702 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 SRBD1Q8N5C6 995 aaKnown RBP7.42□□□□□ -1.22
CD46-212ENST00000469535 C1orf54Q8WWF1 131 aa7.42□□□□□ -1.22
CD46-212ENST00000469535 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.42□□□□□ -1.22
CD46-212ENST00000469535 ADCY10Q96PN6 1610 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 SUPT3HO75486 399 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 DNAJC8O75937 253 aaPredicted RBP7.41□□□□□ -1.22
CD46-212ENST00000469535 ZNF286BP0CG31 522 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 SETSIPP0DME0 302 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 SLC11A2P49281 568 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 SGO1Q5FBB7 561 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 ENOSF1Q7L5Y1 443 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 NT5DC4Q86YG4 428 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 FBXO32Q969P5 355 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 RAB23Q9ULC3 237 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 E2F8A0AVK6 867 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 SYCE1LA8MT33 242 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 RASA4BC9J798 803 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 CFAP99D6REC4 459 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 RASA4O43374 803 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 FAM200BP0CF97 657 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 TYK2P29597 1187 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 GCLCP48506 637 aaPredicted RBP7.41□□□□□ -1.22
CD46-212ENST00000469535 TAF6P49848 677 aa7.41□□□□□ -1.22
CD46-212ENST00000469535 BTG3Q14201 252 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms