RNA–Protein interactions for RNA: ENST00000467613.5

UBP1-208, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 659 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-208ENST00000467613 UBXN1Q04323 297 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 NFX1Q12986 1120 aaKnown RBP7.05□□□□□ -1.28
UBP1-208ENST00000467613 NAB2Q15742 525 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 TCTN1Q2MV58 587 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 SEZ6Q53EL9 994 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 SPECC1LQ69YQ0 1117 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 KRT39Q6A163 491 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 MFSD5Q6N075 450 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 NYAP1Q6ZVC0 841 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 SLC24A5Q71RS6 500 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 SV2AQ7L0J3 742 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 EFCAB13Q8IY85 973 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 THNSL1Q8IYQ7 743 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 RSPH1Q8WYR4 309 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 IQCDQ96DY2 449 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 FAXDC2Q96IV6 333 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 ACAP3Q96P50 834 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 EDEM3Q9BZQ6 932 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 NXF3Q9H4D5 531 aaKnown RBP7.05□□□□□ -1.28
UBP1-208ENST00000467613 RPF1Q9H9Y2 349 aaKnown RBP7.05□□□□□ -1.28
UBP1-208ENST00000467613 PDE11AQ9HCR9 933 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 SIX2Q9NPC8 291 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 TOPORSQ9NS56 1045 aaPredicted RBP7.05□□□□□ -1.28
UBP1-208ENST00000467613 C1orf112Q9NSG2 853 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 TMEM39AQ9NV64 488 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 SNTG2Q9NY99 539 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 IMPACTQ9P2X3 320 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 ATP11BQ9Y2G3 1177 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 GIT1Q9Y2X7 761 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 PCDHB2Q9Y5E7 798 aa7.05□□□□□ -1.28
UBP1-208ENST00000467613 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.05□□□□□ -1.28
UBP1-208ENST00000467613 LAMA3Q16787 3333 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.04□□□□□ -1.28
UBP1-208ENST00000467613 A0A1W2PQJ5 194 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 GRXCR2A6NFK2 248 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 LACTBL1A8MY62 500 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 ENPP3O14638 875 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 PTGESO14684 152 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 ZC3H11AO75152 810 aaKnown RBP eCLIP7.04□□□□□ -1.28
UBP1-208ENST00000467613 RECQL4O94761 1208 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 VNN1O95497 513 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 STAU1O95793 577 aaKnown RBP7.04□□□□□ -1.28
UBP1-208ENST00000467613 TPM2P07951 284 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 PFKMP08237 780 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 CYP3A5P20815 502 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 PON1P27169 355 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 CYP2C18P33260 490 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 MATR3P43243 847 aaKnown RBP eCLIP7.04□□□□□ -1.28
UBP1-208ENST00000467613 MXI1P50539 228 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 CCDC173Q0VFZ6 552 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 EXOC3L4Q17RC7 722 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 DUOXA2Q1HG44 320 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 DCAF17Q5H9S7 520 aaPredicted RBP7.04□□□□□ -1.28
UBP1-208ENST00000467613 TDRD10Q5VZ19 366 aaKnown RBP7.04□□□□□ -1.28
UBP1-208ENST00000467613 TWF2Q6IBS0 349 aaKnown RBP7.04□□□□□ -1.28
UBP1-208ENST00000467613 CNKSR3Q6P9H4 555 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 TRIM65Q6PJ69 517 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 GBP6Q6ZN66 633 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 AGMOQ6ZNB7 445 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 ECHDC2Q86YB7 292 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 EHBP1Q8NDI1 1231 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 FBXL13Q8NEE6 735 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 DBF4BQ8NFT6 615 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 OR5B17Q8NGF7 314 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 SEPT8Q92599 483 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 SCLYQ96I15 445 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 ZMAT2Q96NC0 199 aaKnown RBP7.04□□□□□ -1.28
UBP1-208ENST00000467613 PPP1R10Q96QC0 940 aaKnown RBP7.04□□□□□ -1.28
UBP1-208ENST00000467613 FNBP1Q96RU3 617 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 POP1Q99575 1024 aaKnown RBP7.04□□□□□ -1.28
UBP1-208ENST00000467613 ADAM2Q99965 735 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 NUP58Q9BVL2 599 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 CCDC94Q9BW85 323 aaPredicted RBP7.04□□□□□ -1.28
UBP1-208ENST00000467613 NAA15Q9BXJ9 866 aaKnown RBP7.04□□□□□ -1.28
UBP1-208ENST00000467613 TRIM6Q9C030 488 aaPredicted RBP7.04□□□□□ -1.28
UBP1-208ENST00000467613 CXCL16Q9H2A7 254 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 GANQ9H2C0 597 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 VRTNQ9H8Y1 702 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 UBN1Q9NPG3 1134 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 RNF19AQ9NV58 838 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 HES2Q9Y543 173 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 MYH10P35580 1976 aa7.04□□□□□ -1.28
UBP1-208ENST00000467613 SMIM28A0A1B0GU29 152 aa7.03□□□□□ -1.28
UBP1-208ENST00000467613 ANO9A1A5B4 782 aa7.03□□□□□ -1.28
UBP1-208ENST00000467613 ARL5CA6NH57 179 aa7.03□□□□□ -1.28
UBP1-208ENST00000467613 MEIS3P2A8K0S8 358 aa7.03□□□□□ -1.28
UBP1-208ENST00000467613 EPHB6O15197 1021 aa7.03□□□□□ -1.28
UBP1-208ENST00000467613 ASS1P00966 412 aaKnown RBP7.03□□□□□ -1.28
UBP1-208ENST00000467613 GYPCP04921 128 aa7.03□□□□□ -1.28
UBP1-208ENST00000467613 NFICP08651 508 aa7.03□□□□□ -1.28
UBP1-208ENST00000467613 DLATP10515 647 aaKnown RBP7.03□□□□□ -1.28
UBP1-208ENST00000467613 HARSP12081 509 aaKnown RBP7.03□□□□□ -1.28
UBP1-208ENST00000467613 ITGA4P13612 1032 aa7.03□□□□□ -1.28
UBP1-208ENST00000467613 TNNI1P19237 187 aa7.03□□□□□ -1.28
UBP1-208ENST00000467613 SLC9A1P19634 815 aa7.03□□□□□ -1.28
UBP1-208ENST00000467613 RFX1P22670 979 aa7.03□□□□□ -1.28
UBP1-208ENST00000467613 FECHP22830 423 aa7.03□□□□□ -1.28
UBP1-208ENST00000467613 AKAP5P24588 427 aa7.03□□□□□ -1.28
UBP1-208ENST00000467613 LRPAP1P30533 357 aa7.03□□□□□ -1.28
UBP1-208ENST00000467613 HNRNPH3P31942 346 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms