RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 FUT2Q10981 343 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 EMC2Q15006 297 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 IQCEQ6IPM2 695 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 SLC27A1Q6PCB7 646 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 APOA5Q6Q788 366 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 FERMT3Q86UX7 667 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 HS6ST3Q8IZP7 471 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 GLIS3Q8NEA6 775 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 CCDC12Q8WUD4 166 aaPredicted RBP11.36□□□□□ -0.59
HDAC3-203ENST00000467533 DDX27Q96GQ7 796 aaKnown RBP11.36□□□□□ -0.59
HDAC3-203ENST00000467533 HHIPQ96QV1 700 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 ZMYND12Q9H0C1 365 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 DHX33Q9H6R0 707 aaKnown RBP11.36□□□□□ -0.59
HDAC3-203ENST00000467533 CYP4F11Q9HBI6 524 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 GTSE1Q9NYZ3 720 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 INSL5Q9Y5Q6 135 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 RBM8AQ9Y5S9 174 aaKnown RBP11.36□□□□□ -0.59
HDAC3-203ENST00000467533 BACE2Q9Y5Z0 518 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 CDX4O14627 284 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-203ENST00000467533 DCLK1O15075 740 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 ATG13O75143 517 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 THP07101 528 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 TKTP29401 623 aaKnown RBP11.35□□□□□ -0.59
HDAC3-203ENST00000467533 RDXP35241 583 aaKnown RBP11.35□□□□□ -0.59
HDAC3-203ENST00000467533 ARPP19P56211 112 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 PTENP60484 403 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 SIM1P81133 766 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-203ENST00000467533 MBTD1Q05BQ5 628 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 TFDP1Q14186 410 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 TEAD2Q15562 447 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 ANKS3Q6ZW76 656 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 CYP2U1Q7Z449 544 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 HAUS6Q7Z4H7 955 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 SGMS1Q86VZ5 419 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 ZNF579Q8NAF0 562 aaKnown RBP11.35□□□□□ -0.59
HDAC3-203ENST00000467533 ZNF461Q8TAF7 563 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 RSPRY1Q96DX4 576 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 ZFYVE19Q96K21 471 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 MTRQ99707 1265 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 ASAH2Q9NR71 780 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 SNTG2Q9NY99 539 aa11.35□□□□□ -0.59
HDAC3-203ENST00000467533 GOLGA8AA7E2F4 631 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 GOLGA8BA8MQT2 603 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 PATE3B3GLJ2 98 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 H0Y626 953 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 PTGESO14684 152 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 B4GALT5O43286 388 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 ZBTB43O43298 467 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 DKC1O60832 514 aaKnown RBP eCLIP11.34□□□□□ -0.59
HDAC3-203ENST00000467533 MOSPD3O75425 235 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 TRIM16O95361 564 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 GNA11P29992 359 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 FCHO2Q0JRZ9 810 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 C19orf57Q0VDD7 668 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 SCAPQ12770 1279 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 AMHR2Q16671 573 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 PFKFB3Q16875 520 aaPredicted RBP11.34□□□□□ -0.59
HDAC3-203ENST00000467533 ARHGAP29Q52LW3 1261 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 CHCHD4Q8N4Q1 142 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 CAMKK1Q8N5S9 505 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 LEMD2Q8NC56 503 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 HNRNPLLQ8WVV9 542 aaKnown RBP11.34□□□□□ -0.59
HDAC3-203ENST00000467533 LRIG1Q96JA1 1093 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 ZNF512Q96ME7 567 aaPredicted RBP11.34□□□□□ -0.59
HDAC3-203ENST00000467533 PPME1Q9Y570 386 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 FREM2Q5SZK8 3169 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 THADAQ6YHU6 1953 aa11.34□□□□□ -0.59
HDAC3-203ENST00000467533 I3L4J1 428 aa11.33□□□□□ -0.6
HDAC3-203ENST00000467533 DPYSL4O14531 572 aa11.33□□□□□ -0.6
HDAC3-203ENST00000467533 B3GAT3O94766 335 aa11.33□□□□□ -0.6
HDAC3-203ENST00000467533 SEC24AO95486 1093 aa11.33□□□□□ -0.6
HDAC3-203ENST00000467533 ATF2P15336 505 aa11.33□□□□□ -0.6
HDAC3-203ENST00000467533 MAPK8P45983 427 aa11.33□□□□□ -0.6
HDAC3-203ENST00000467533 QARSP47897 775 aaKnown RBP11.33□□□□□ -0.6
HDAC3-203ENST00000467533 TWF1Q12792 350 aa11.33□□□□□ -0.6
HDAC3-203ENST00000467533 MXD4Q14582 209 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-203ENST00000467533 B3GNT9Q6UX72 402 aa11.33□□□□□ -0.6
HDAC3-203ENST00000467533 GPIHBP1Q8IV16 184 aa11.33□□□□□ -0.6
HDAC3-203ENST00000467533 TCEAL8Q8IYN2 117 aa11.33□□□□□ -0.6
HDAC3-203ENST00000467533 BICD2Q8TD16 824 aa11.33□□□□□ -0.6
HDAC3-203ENST00000467533 TMEM209Q96SK2 561 aa11.33□□□□□ -0.6
HDAC3-203ENST00000467533 GPR88Q9GZN0 384 aa11.33□□□□□ -0.6
HDAC3-203ENST00000467533 KIAA1549LQ6ZVL6 1849 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 CYSRT1A8MQ03 144 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 TMEM189-UBE2V1I3L0A0 370 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 TRAPPC3O43617 180 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 RNF40O75150 1001 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 RECQL4O94761 1208 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 ABLIM3O94929 683 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 TDP2O95551 362 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 CAPNS1P04632 268 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 USP11P51784 963 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 TNK2Q07912 1038 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 LMAN2Q12907 356 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 CAPSQ13938 189 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 PMS2CLQ68D20 193 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 SLC8B1Q6J4K2 584 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 IFNLR1Q8IU57 520 aaPredicted RBP11.32□□□□□ -0.6
HDAC3-203ENST00000467533 SMC5Q8IY18 1101 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 SHKBP1Q8TBC3 707 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms