RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 FDXACB1Q9BRP7 624 aaPredicted RBP10.26□□□□□ -0.77
APOBEC1-202ENST00000467171 KATNAL1Q9BW62 490 aa10.26□□□□□ -0.77
APOBEC1-202ENST00000467171 CFHR5Q9BXR6 569 aa10.26□□□□□ -0.77
APOBEC1-202ENST00000467171 PACSIN1Q9BY11 444 aa10.26□□□□□ -0.77
APOBEC1-202ENST00000467171 ISCUQ9H1K1 167 aa10.26□□□□□ -0.77
APOBEC1-202ENST00000467171 ADAMTS10Q9H324 1103 aa10.26□□□□□ -0.77
APOBEC1-202ENST00000467171 MINDY3Q9H8M7 445 aa10.26□□□□□ -0.77
APOBEC1-202ENST00000467171 C1orf112Q9NSG2 853 aa10.26□□□□□ -0.77
APOBEC1-202ENST00000467171 NOCTQ9UK39 431 aaKnown RBP10.26□□□□□ -0.77
APOBEC1-202ENST00000467171 CNTN6Q9UQ52 1028 aa10.26□□□□□ -0.77
APOBEC1-202ENST00000467171 CAPN6Q9Y6Q1 641 aa10.26□□□□□ -0.77
APOBEC1-202ENST00000467171 MYH11P35749 1972 aa10.26□□□□□ -0.77
APOBEC1-202ENST00000467171 NCANO14594 1321 aa10.26□□□□□ -0.77
APOBEC1-202ENST00000467171 PTPRJQ12913 1337 aa10.26□□□□□ -0.77
APOBEC1-202ENST00000467171 MYH9P35579 1960 aaKnown RBP10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 B4GALT5O43286 388 aa10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 TOMM70O94826 608 aa10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 HARSP12081 509 aaKnown RBP10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 CYP11B1P15538 503 aa10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 TCP1P17987 556 aaKnown RBP10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 TNFSF9P41273 254 aa10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 PSMC4P43686 418 aa10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 GJA9P57773 515 aa10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 LACTBP83111 547 aaPredicted RBP10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 BIRC3Q13489 604 aa10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 NCOA4Q13772 614 aa10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 RSRC2Q7L4I2 434 aaKnown RBP10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 APBB1IPQ7Z5R6 666 aaPredicted RBP10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 ZBTB33Q86T24 672 aa10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 OR5B17Q8NGF7 314 aa10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 UBXN4Q92575 508 aa10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 TAF4BQ92750 862 aa10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 GCOM2Q9BZD3 368 aaPredicted RBP10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 UPF3AQ9H1J1 476 aaKnown RBP10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 PDZD7Q9H5P4 517 aa10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 ASB7Q9H672 318 aa10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 SETD4Q9NVD3 440 aa10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 SNX12Q9UMY4 172 aa10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 DOCK5Q9H7D0 1870 aa10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 ZNFX1Q9P2E3 1918 aaKnown RBP10.25□□□□□ -0.77
APOBEC1-202ENST00000467171 A0A1B0GUA9 196 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 CTAGE15A4D2H0 777 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 ANKRD62A6NC57 917 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 GPR25O00155 361 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 ENC1O14682 589 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 CYP26A1O43174 497 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 TSPAN1O60635 241 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 GPR32O75388 356 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 SGPL1O95470 568 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 ASS1P00966 412 aaKnown RBP10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 VTNP04004 478 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 CTAGE8P0CG41 777 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 STAG3L1P0CL83 205 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 GNAT1P11488 350 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 CYBAP13498 195 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 CHRNB2P17787 502 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 ARF4P18085 180 aaPredicted RBP10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 ACO1P21399 889 aaKnown RBP10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 GALCP54803 685 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 HADHBP55084 474 aaKnown RBP10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 CHMP4BP1P59074 171 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 PURAQ00577 322 aaKnown RBP10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 CDR2Q01850 454 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 ITIH3Q06033 890 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 CKAP4Q07065 602 aaKnown RBP10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 CUL2Q13617 745 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 LAPTM4AQ15012 233 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 FSCN1Q16658 493 aaKnown RBP10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 SGSM1Q2NKQ1 1148 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 DCAF4L1Q3SXM0 396 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 LMBRD2Q68DH5 695 aaPredicted RBP10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 MTERF4Q7Z6M4 381 aaKnown RBP10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 SLFN11Q7Z7L1 901 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 CTAGE6Q86UF2 777 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 NT5DC4Q86YG4 428 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 CD302Q8IX05 232 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 CTAGE4Q8IX94 777 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 RPUSD2Q8IZ73 545 aaKnown RBP10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 NME8Q8N427 588 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 UBR7Q8N806 425 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 LRRN4CLQ8ND94 238 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 NLRP7Q8WX94 980 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 RFFLQ8WZ73 363 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 DDX1Q92499 740 aaKnown RBP10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 TSC1Q92574 1164 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 RABGGTAQ92696 567 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 GOLGA1Q92805 767 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 IMPG2Q9BZV3 1241 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 RPF1Q9H9Y2 349 aaKnown RBP10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 APOBEC3GQ9HC16 384 aaKnown RBP10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 RNF14Q9UBS8 474 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 HYOU1Q9Y4L1 999 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 PCDHB2Q9Y5E7 798 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 WDR81Q562E7 1941 aa10.24□□□□□ -0.77
APOBEC1-202ENST00000467171 SIP14410 1827 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 C17orf102A2RUQ5 167 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 GRID2IPA4D2P6 1211 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 CES2O00748 559 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 BUB1O43683 1085 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 PHACTR2O75167 634 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms